Gene : Glyma.16G005600 G. max Wm82.a2.v1
Defline:  (1 of 1) PTHR13561:SF20 - MUTAGEN-SENSITIVE 101 Genomic Order:  56
Name:  ? Glyma.16G005600 Secondary Identifier:  ? PAC:30561044
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.16G005600 0.5kb upstream 0.5kb upstream 28332 true Chr16: 387135-415466 Glycine max
Glyma.16G005600 0.5kb upstream 0.5kb upstream 500 false Chr16: 414967-415466 Glycine max
Glyma.16G005600 0.5kb downstream 0.5kb downstream 28332 true Chr16: 386635-414966 Glycine max
Glyma.16G005600 0.5kb downstream 0.5kb downstream 500 false Chr16: 386635-387134 Glycine max
Glyma.16G005600 1.0kb upstream 1.0kb upstream 28832 true Chr16: 387135-415966 Glycine max
Glyma.16G005600 1.0kb upstream 1.0kb upstream 1000 false Chr16: 414967-415966 Glycine max
Glyma.16G005600 1.0kb downstream 1.0kb downstream 28832 true Chr16: 386135-414966 Glycine max
Glyma.16G005600 1.0kb downstream 1.0kb downstream 1000 false Chr16: 386135-387134 Glycine max
Glyma.16G005600 2.0kb upstream 2.0kb upstream 29832 true Chr16: 387135-416966 Glycine max
Glyma.16G005600 2.0kb upstream 2.0kb upstream 2000 false Chr16: 414967-416966 Glycine max
Glyma.16G005600 2.0kb downstream 2.0kb downstream 29832 true Chr16: 385135-414966 Glycine max
Glyma.16G005600 2.0kb downstream 2.0kb downstream 2000 false Chr16: 385135-387134 Glycine max
Glyma.16G005600 5.0kb upstream 5.0kb upstream 32832 true Chr16: 387135-419966 Glycine max
Glyma.16G005600 5.0kb upstream 5.0kb upstream 5000 false Chr16: 414967-419966 Glycine max
Glyma.16G005600 5.0kb downstream 5.0kb downstream 32832 true Chr16: 382135-414966 Glycine max
Glyma.16G005600 5.0kb downstream 5.0kb downstream 5000 false Chr16: 382135-387134 Glycine max
Glyma.16G005600 10.0kb upstream 10.0kb upstream 37832 true Chr16: 387135-424966 Glycine max
Glyma.16G005600 10.0kb upstream 10.0kb upstream 10000 false Chr16: 414967-424966 Glycine max
Glyma.16G005600 10.0kb downstream 10.0kb downstream 37832 true Chr16: 377135-414966 Glycine max
Glyma.16G005600 10.0kb downstream 10.0kb downstream 10000 false Chr16: 377135-387134 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306389 5265 Fabidae View MSA
124067352 5270 Rosid View MSA
123739984 5271 Pentapetalae View MSA
122791325 5272 Eudicot View MSA
122043112 5273 Angiosperm View MSA
121348037 5274 Embryophyte View MSA
123425629 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.65803 0.0 30.266    
cufflinks 5.98736 0.0 28.5282    
cufflinks 9.5241 0.0 50.4368   High
cufflinks 5.60169 0.0 33.8105    
cufflinks 4.12404 0.0 23.2208   Low
cufflinks 4.88527 0.0 27.7439    
cufflinks 5.61232 0.0 27.0109    
cufflinks 4.80223 0.0 23.5668    
cufflinks 4.77685 0.0 27.5023    
cufflinks 0.055     Low  
cufflinks 0.056        
cufflinks 0.114     Low High
cufflinks 0.059     Low  
cufflinks 0.06     Low  
cufflinks 0.046     Low Low
cufflinks 0.092     Low  
cufflinks 0.06     Low  
cufflinks 0.107     Low High
cufflinks 0.096     Low  
cufflinks 0.104       High
cufflinks 0.049     Low Low
cufflinks 0.105       High
cufflinks 0.095     Low  
cufflinks 0.063        
cufflinks 0.096     Low  
cufflinks 0.061     Low  

0 Strain