Gene : Glyma.16G048100 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR11607//PTHR11607:SF36 - ALPHA-MANNOSIDASE Genomic Order:  481
Name:  ? Glyma.16G048100 Secondary Identifier:  ? PAC:30560637
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.16G048100 0.5kb upstream 0.5kb upstream 16793 true Chr16: 4571143-4587935 Glycine max
Glyma.16G048100 0.5kb upstream 0.5kb upstream 500 false Chr16: 4571143-4571642 Glycine max
Glyma.16G048100 0.5kb downstream 0.5kb downstream 16793 true Chr16: 4571643-4588435 Glycine max
Glyma.16G048100 0.5kb downstream 0.5kb downstream 500 false Chr16: 4587936-4588435 Glycine max
Glyma.16G048100 1.0kb upstream 1.0kb upstream 17293 true Chr16: 4570643-4587935 Glycine max
Glyma.16G048100 1.0kb upstream 1.0kb upstream 1000 false Chr16: 4570643-4571642 Glycine max
Glyma.16G048100 1.0kb downstream 1.0kb downstream 17293 true Chr16: 4571643-4588935 Glycine max
Glyma.16G048100 1.0kb downstream 1.0kb downstream 1000 false Chr16: 4587936-4588935 Glycine max
Glyma.16G048100 2.0kb upstream 2.0kb upstream 18293 true Chr16: 4569643-4587935 Glycine max
Glyma.16G048100 2.0kb upstream 2.0kb upstream 2000 false Chr16: 4569643-4571642 Glycine max
Glyma.16G048100 2.0kb downstream 2.0kb downstream 18293 true Chr16: 4571643-4589935 Glycine max
Glyma.16G048100 2.0kb downstream 2.0kb downstream 2000 false Chr16: 4587936-4589935 Glycine max
Glyma.16G048100 5.0kb upstream 5.0kb upstream 21293 true Chr16: 4566643-4587935 Glycine max
Glyma.16G048100 5.0kb upstream 5.0kb upstream 5000 false Chr16: 4566643-4571642 Glycine max
Glyma.16G048100 5.0kb downstream 5.0kb downstream 21293 true Chr16: 4571643-4592935 Glycine max
Glyma.16G048100 5.0kb downstream 5.0kb downstream 5000 false Chr16: 4587936-4592935 Glycine max
Glyma.16G048100 10.0kb upstream 10.0kb upstream 26293 true Chr16: 4561643-4587935 Glycine max
Glyma.16G048100 10.0kb upstream 10.0kb upstream 10000 false Chr16: 4561643-4571642 Glycine max
Glyma.16G048100 10.0kb downstream 10.0kb downstream 26293 true Chr16: 4571643-4597935 Glycine max
Glyma.16G048100 10.0kb downstream 10.0kb downstream 10000 false Chr16: 4587936-4597935 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301666 5265 Fabidae View MSA
124072093 5270 Rosid View MSA
123740156 5271 Pentapetalae View MSA
122794150 5272 Eudicot View MSA
122044684 5273 Angiosperm View MSA
121351343 5274 Embryophyte View MSA
123424648 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.57482 0.0 29.9406   Low
cufflinks 18.106 0.0 59.5695    
cufflinks 18.7018 0.0 71.4055    
cufflinks 26.2057 0.0 95.3404 High  
cufflinks 12.0079 0.0 42.4808    
cufflinks 15.941 0.0 51.308    
cufflinks 115.702 0.0 772.761 High High
cufflinks 11.9222 0.0 42.1628    
cufflinks 19.0558 0.0 73.1064    
cufflinks 1.849        
cufflinks 0.628       Low
cufflinks 2.334       High
cufflinks 1.751        
cufflinks 1.311        
cufflinks 0.61       Low
cufflinks 1.346        
cufflinks 0.951        
cufflinks 2.929       High
cufflinks 2.022        
cufflinks 1.581        
cufflinks 0.612       Low
cufflinks 1.447        
cufflinks 1.11        
cufflinks 0.769       Low
cufflinks 1.323        
cufflinks 1.268        

0 Strain