Gene : Glyma.16G049200 G. max Wm82.a2.v1
Defline:  (1 of 2) PF03879 - Cgr1 family (Cgr1) Genomic Order:  492
Name:  ? Glyma.16G049200 Secondary Identifier:  ? PAC:30559932
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.16G049200 0.5kb upstream 0.5kb upstream 1495 true Chr16: 4709603-4711097 Glycine max
Glyma.16G049200 0.5kb upstream 0.5kb upstream 500 false Chr16: 4710598-4711097 Glycine max
Glyma.16G049200 0.5kb downstream 0.5kb downstream 1495 true Chr16: 4709103-4710597 Glycine max
Glyma.16G049200 0.5kb downstream 0.5kb downstream 500 false Chr16: 4709103-4709602 Glycine max
Glyma.16G049200 1.0kb upstream 1.0kb upstream 1995 true Chr16: 4709603-4711597 Glycine max
Glyma.16G049200 1.0kb upstream 1.0kb upstream 1000 false Chr16: 4710598-4711597 Glycine max
Glyma.16G049200 1.0kb downstream 1.0kb downstream 1995 true Chr16: 4708603-4710597 Glycine max
Glyma.16G049200 1.0kb downstream 1.0kb downstream 1000 false Chr16: 4708603-4709602 Glycine max
Glyma.16G049200 2.0kb upstream 2.0kb upstream 2995 true Chr16: 4709603-4712597 Glycine max
Glyma.16G049200 2.0kb upstream 2.0kb upstream 2000 false Chr16: 4710598-4712597 Glycine max
Glyma.16G049200 2.0kb downstream 2.0kb downstream 2995 true Chr16: 4707603-4710597 Glycine max
Glyma.16G049200 2.0kb downstream 2.0kb downstream 2000 false Chr16: 4707603-4709602 Glycine max
Glyma.16G049200 5.0kb upstream 5.0kb upstream 5995 true Chr16: 4709603-4715597 Glycine max
Glyma.16G049200 5.0kb upstream 5.0kb upstream 5000 false Chr16: 4710598-4715597 Glycine max
Glyma.16G049200 5.0kb downstream 5.0kb downstream 5995 true Chr16: 4704603-4710597 Glycine max
Glyma.16G049200 5.0kb downstream 5.0kb downstream 5000 false Chr16: 4704603-4709602 Glycine max
Glyma.16G049200 10.0kb upstream 10.0kb upstream 10995 true Chr16: 4709603-4720597 Glycine max
Glyma.16G049200 10.0kb upstream 10.0kb upstream 10000 false Chr16: 4710598-4720597 Glycine max
Glyma.16G049200 10.0kb downstream 10.0kb downstream 10995 true Chr16: 4699603-4710597 Glycine max
Glyma.16G049200 10.0kb downstream 10.0kb downstream 10000 false Chr16: 4699603-4709602 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307427 5265 Fabidae View MSA
124066001 5270 Rosid View MSA
123746651 5271 Pentapetalae View MSA
122786473 5272 Eudicot View MSA
122044383 5273 Angiosperm View MSA
121348750 5274 Embryophyte View MSA
123426387 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 19.2375 0.0 51.6064   High
cufflinks 12.0915 0.0 33.4223    
cufflinks 6.1043 0.0 18.3812   Low
cufflinks 10.8761 0.0 30.2939    
cufflinks 15.3281 0.0 41.4325    
cufflinks 13.3753 0.0 36.5722    
cufflinks 13.861 0.0 37.7816    
cufflinks 13.9469 0.0 38.1156    
cufflinks 14.2643 0.0 38.8931    
cufflinks 8.81     High  
cufflinks 5.265       Low
cufflinks 9.672     High  
cufflinks 13.184     High High
cufflinks 21.438     High High
cufflinks 5.739     High Low
cufflinks 7.648     High  
cufflinks 19.585     High High
cufflinks 9.235     High  
cufflinks 9.935     High  
cufflinks 6.408        
cufflinks 7.259     High  
cufflinks 6.099        
cufflinks 9.617     High  
cufflinks 6.609     High  
cufflinks 6.057        
cufflinks 10.054     High  

0 Strain