Gene : Glyma.16G049300 G. max Wm82.a2.v1
Defline:  (1 of 7) 2.7.2.4 - Aspartate kinase / Aspartokinase Genomic Order:  493
Name:  ? Glyma.16G049300 Secondary Identifier:  ? PAC:30559900
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Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax HOMOSERSYN-PWY Glycine max pathologic  
Gmax PWY-3001 Glycine max pathologic  
Gmax PWY-5097 Glycine max pathologic  
Gmax PWY-724 Glycine max pathologic  
Gmax THRESYN-PWY Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.16G049300 0.5kb upstream 0.5kb upstream 6734 true Chr16: 4712941-4719674 Glycine max
Glyma.16G049300 0.5kb upstream 0.5kb upstream 500 false Chr16: 4719175-4719674 Glycine max
Glyma.16G049300 0.5kb downstream 0.5kb downstream 6734 true Chr16: 4712441-4719174 Glycine max
Glyma.16G049300 0.5kb downstream 0.5kb downstream 500 false Chr16: 4712441-4712940 Glycine max
Glyma.16G049300 1.0kb upstream 1.0kb upstream 7234 true Chr16: 4712941-4720174 Glycine max
Glyma.16G049300 1.0kb upstream 1.0kb upstream 1000 false Chr16: 4719175-4720174 Glycine max
Glyma.16G049300 1.0kb downstream 1.0kb downstream 7234 true Chr16: 4711941-4719174 Glycine max
Glyma.16G049300 1.0kb downstream 1.0kb downstream 1000 false Chr16: 4711941-4712940 Glycine max
Glyma.16G049300 2.0kb upstream 2.0kb upstream 8234 true Chr16: 4712941-4721174 Glycine max
Glyma.16G049300 2.0kb upstream 2.0kb upstream 2000 false Chr16: 4719175-4721174 Glycine max
Glyma.16G049300 2.0kb downstream 2.0kb downstream 8234 true Chr16: 4710941-4719174 Glycine max
Glyma.16G049300 2.0kb downstream 2.0kb downstream 2000 false Chr16: 4710941-4712940 Glycine max
Glyma.16G049300 5.0kb upstream 5.0kb upstream 11234 true Chr16: 4712941-4724174 Glycine max
Glyma.16G049300 5.0kb upstream 5.0kb upstream 5000 false Chr16: 4719175-4724174 Glycine max
Glyma.16G049300 5.0kb downstream 5.0kb downstream 11234 true Chr16: 4707941-4719174 Glycine max
Glyma.16G049300 5.0kb downstream 5.0kb downstream 5000 false Chr16: 4707941-4712940 Glycine max
Glyma.16G049300 10.0kb upstream 10.0kb upstream 16234 true Chr16: 4712941-4729174 Glycine max
Glyma.16G049300 10.0kb upstream 10.0kb upstream 10000 false Chr16: 4719175-4729174 Glycine max
Glyma.16G049300 10.0kb downstream 10.0kb downstream 16234 true Chr16: 4702941-4719174 Glycine max
Glyma.16G049300 10.0kb downstream 10.0kb downstream 10000 false Chr16: 4702941-4712940 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122298173 5265 Fabidae View MSA
124036346 5270 Rosid View MSA
123609707 5271 Pentapetalae View MSA
122796231 5272 Eudicot View MSA
122050797 5273 Angiosperm View MSA
121346150 5274 Embryophyte View MSA
123424787 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.66209 0.0 24.2806    
cufflinks 10.716 0.0 33.6512    
cufflinks 4.64465 0.0 15.7436    
cufflinks 17.6527 0.0 53.5443   High
cufflinks 2.09448 0.0 9.21509    
cufflinks 1.08049 0.0 4.29017   Low
cufflinks 31.9304 0.0 105.909 High High
cufflinks 6.36256 0.0 23.3384    
cufflinks 1.22611 0.0 6.33147   Low
cufflinks 2.004        
cufflinks 0.063       Low
cufflinks 1.569        
cufflinks 0.122        
cufflinks 0.105       Low
cufflinks 0.079       Low
cufflinks 1.898        
cufflinks 0.934        
cufflinks 3.222       High
cufflinks 2.426        
cufflinks 2.924        
cufflinks 0.076       Low
cufflinks 2.545        
cufflinks 3.392       High
cufflinks 0.083       Low
cufflinks 2.382        
cufflinks 0.203        

0 Strain