Gene : Glyma.16G049900 G. max Wm82.a2.v1
Defline:  (1 of 39) PF07765 - KIP1-like protein (KIP1) Genomic Order:  499
Name:  ? Glyma.16G049900 Secondary Identifier:  ? PAC:30559466
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.16G049900 0.5kb upstream 0.5kb upstream 2011 true Chr16: 4782615-4784625 Glycine max
Glyma.16G049900 0.5kb upstream 0.5kb upstream 500 false Chr16: 4784126-4784625 Glycine max
Glyma.16G049900 0.5kb downstream 0.5kb downstream 2011 true Chr16: 4782115-4784125 Glycine max
Glyma.16G049900 0.5kb downstream 0.5kb downstream 500 false Chr16: 4782115-4782614 Glycine max
Glyma.16G049900 1.0kb upstream 1.0kb upstream 2511 true Chr16: 4782615-4785125 Glycine max
Glyma.16G049900 1.0kb upstream 1.0kb upstream 1000 false Chr16: 4784126-4785125 Glycine max
Glyma.16G049900 1.0kb downstream 1.0kb downstream 2511 true Chr16: 4781615-4784125 Glycine max
Glyma.16G049900 1.0kb downstream 1.0kb downstream 1000 false Chr16: 4781615-4782614 Glycine max
Glyma.16G049900 2.0kb upstream 2.0kb upstream 3511 true Chr16: 4782615-4786125 Glycine max
Glyma.16G049900 2.0kb upstream 2.0kb upstream 2000 false Chr16: 4784126-4786125 Glycine max
Glyma.16G049900 2.0kb downstream 2.0kb downstream 3511 true Chr16: 4780615-4784125 Glycine max
Glyma.16G049900 2.0kb downstream 2.0kb downstream 2000 false Chr16: 4780615-4782614 Glycine max
Glyma.16G049900 5.0kb upstream 5.0kb upstream 6511 true Chr16: 4782615-4789125 Glycine max
Glyma.16G049900 5.0kb upstream 5.0kb upstream 5000 false Chr16: 4784126-4789125 Glycine max
Glyma.16G049900 5.0kb downstream 5.0kb downstream 6511 true Chr16: 4777615-4784125 Glycine max
Glyma.16G049900 5.0kb downstream 5.0kb downstream 5000 false Chr16: 4777615-4782614 Glycine max
Glyma.16G049900 10.0kb upstream 10.0kb upstream 11511 true Chr16: 4782615-4794125 Glycine max
Glyma.16G049900 10.0kb upstream 10.0kb upstream 10000 false Chr16: 4784126-4794125 Glycine max
Glyma.16G049900 10.0kb downstream 10.0kb downstream 11511 true Chr16: 4772615-4784125 Glycine max
Glyma.16G049900 10.0kb downstream 10.0kb downstream 10000 false Chr16: 4772615-4782614 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122247316 5265 Fabidae Singleton cluster - no MSA
124062637 5270 Rosid View MSA
123744741 5271 Pentapetalae View MSA
122794201 5272 Eudicot View MSA
122048617 5273 Angiosperm View MSA
121311040 5274 Embryophyte View MSA
123348394 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.28192 0.0 1.11214    
cufflinks 0.425913 0.0 1.65423    
cufflinks 0.245545 0.0 0.971709   Low
cufflinks 0.365952 0.0 1.42857    
cufflinks 0.476501 0.0 1.84156   High
cufflinks 0.291269 0.0 1.14763 Low  
cufflinks 0.308671 0.0 1.21474    
cufflinks 0.485852 0.0 1.87444   High
cufflinks 0.433501 0.0 1.68172    
cufflinks 0.415        
cufflinks 0.607       High
cufflinks 0.102     Low  
cufflinks 0.507       High
cufflinks 0.249        
cufflinks 0.012     Low Low
cufflinks 0.253        
cufflinks 0.174        
cufflinks 0.271        
cufflinks 0.121        
cufflinks 0.13        
cufflinks 0.369        
cufflinks 0.175        
cufflinks 0.214        
cufflinks 0.139        
cufflinks 0.199        
cufflinks 0.318        

0 Strain