Gene : Glyma.16G050700 G. max Wm82.a2.v1
Defline:  (1 of 39) PF02893 - GRAM domain (GRAM) Genomic Order:  507
Name:  ? Glyma.16G050700 Secondary Identifier:  ? PAC:30559091
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Ontology Annotation Displayer

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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.16G050700 0.5kb upstream 0.5kb upstream 2991 true Chr16: 4862471-4865461 Glycine max
Glyma.16G050700 0.5kb upstream 0.5kb upstream 500 false Chr16: 4862471-4862970 Glycine max
Glyma.16G050700 0.5kb downstream 0.5kb downstream 2991 true Chr16: 4862971-4865961 Glycine max
Glyma.16G050700 0.5kb downstream 0.5kb downstream 500 false Chr16: 4865462-4865961 Glycine max
Glyma.16G050700 1.0kb upstream 1.0kb upstream 3491 true Chr16: 4861971-4865461 Glycine max
Glyma.16G050700 1.0kb upstream 1.0kb upstream 1000 false Chr16: 4861971-4862970 Glycine max
Glyma.16G050700 1.0kb downstream 1.0kb downstream 3491 true Chr16: 4862971-4866461 Glycine max
Glyma.16G050700 1.0kb downstream 1.0kb downstream 1000 false Chr16: 4865462-4866461 Glycine max
Glyma.16G050700 2.0kb upstream 2.0kb upstream 4491 true Chr16: 4860971-4865461 Glycine max
Glyma.16G050700 2.0kb upstream 2.0kb upstream 2000 false Chr16: 4860971-4862970 Glycine max
Glyma.16G050700 2.0kb downstream 2.0kb downstream 4491 true Chr16: 4862971-4867461 Glycine max
Glyma.16G050700 2.0kb downstream 2.0kb downstream 2000 false Chr16: 4865462-4867461 Glycine max
Glyma.16G050700 5.0kb upstream 5.0kb upstream 7491 true Chr16: 4857971-4865461 Glycine max
Glyma.16G050700 5.0kb upstream 5.0kb upstream 5000 false Chr16: 4857971-4862970 Glycine max
Glyma.16G050700 5.0kb downstream 5.0kb downstream 7491 true Chr16: 4862971-4870461 Glycine max
Glyma.16G050700 5.0kb downstream 5.0kb downstream 5000 false Chr16: 4865462-4870461 Glycine max
Glyma.16G050700 10.0kb upstream 10.0kb upstream 12491 true Chr16: 4852971-4865461 Glycine max
Glyma.16G050700 10.0kb upstream 10.0kb upstream 10000 false Chr16: 4852971-4862970 Glycine max
Glyma.16G050700 10.0kb downstream 10.0kb downstream 12491 true Chr16: 4862971-4875461 Glycine max
Glyma.16G050700 10.0kb downstream 10.0kb downstream 10000 false Chr16: 4865462-4875461 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311278 5265 Fabidae View MSA
124071100 5270 Rosid View MSA
123744777 5271 Pentapetalae View MSA
122797412 5272 Eudicot View MSA
122050342 5273 Angiosperm View MSA
121350470 5274 Embryophyte View MSA
123381748 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.00285 0.0 15.4283    
cufflinks 2.05448 0.0 7.10938    
cufflinks 4.00198 0.0 12.7332    
cufflinks 0.179433 0.0 0.706753    
cufflinks 2.50141 0.0 8.46035    
cufflinks 2.03848 0.0 7.05223    
cufflinks 0.00213422 0.0 0.0144918 Low Low
cufflinks 0.800447 0.0 2.94956    
cufflinks 2.19704 0.0 7.53416    
cufflinks 0.76        
cufflinks 2.14        
cufflinks 1.188        
cufflinks 0.61        
cufflinks 0.217       Low
cufflinks 0.729        
cufflinks 1.171        
cufflinks 3.784       High
cufflinks 0.23       Low
cufflinks 1.104        
cufflinks 0.625        
cufflinks 2.598       High
cufflinks 0.937        
cufflinks 1.484        
cufflinks 2.78       High
cufflinks 0.774        
cufflinks 3.079       High

0 Strain