Gene : Glyma.16G051100 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR11615//PTHR11615:SF157 - NITRATE, FROMATE, IRON DEHYDROGENASE Genomic Order:  511
Name:  ? Glyma.16G051100 Secondary Identifier:  ? PAC:30561841
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.16G051100 0.5kb upstream 0.5kb upstream 2441 true Chr16: 4896279-4898719 Glycine max
Glyma.16G051100 0.5kb upstream 0.5kb upstream 500 false Chr16: 4898220-4898719 Glycine max
Glyma.16G051100 0.5kb downstream 0.5kb downstream 2441 true Chr16: 4895779-4898219 Glycine max
Glyma.16G051100 0.5kb downstream 0.5kb downstream 500 false Chr16: 4895779-4896278 Glycine max
Glyma.16G051100 1.0kb upstream 1.0kb upstream 2941 true Chr16: 4896279-4899219 Glycine max
Glyma.16G051100 1.0kb upstream 1.0kb upstream 1000 false Chr16: 4898220-4899219 Glycine max
Glyma.16G051100 1.0kb downstream 1.0kb downstream 2941 true Chr16: 4895279-4898219 Glycine max
Glyma.16G051100 1.0kb downstream 1.0kb downstream 1000 false Chr16: 4895279-4896278 Glycine max
Glyma.16G051100 2.0kb upstream 2.0kb upstream 3941 true Chr16: 4896279-4900219 Glycine max
Glyma.16G051100 2.0kb upstream 2.0kb upstream 2000 false Chr16: 4898220-4900219 Glycine max
Glyma.16G051100 2.0kb downstream 2.0kb downstream 3941 true Chr16: 4894279-4898219 Glycine max
Glyma.16G051100 2.0kb downstream 2.0kb downstream 2000 false Chr16: 4894279-4896278 Glycine max
Glyma.16G051100 5.0kb upstream 5.0kb upstream 6941 true Chr16: 4896279-4903219 Glycine max
Glyma.16G051100 5.0kb upstream 5.0kb upstream 5000 false Chr16: 4898220-4903219 Glycine max
Glyma.16G051100 5.0kb downstream 5.0kb downstream 6941 true Chr16: 4891279-4898219 Glycine max
Glyma.16G051100 5.0kb downstream 5.0kb downstream 5000 false Chr16: 4891279-4896278 Glycine max
Glyma.16G051100 10.0kb upstream 10.0kb upstream 11941 true Chr16: 4896279-4908219 Glycine max
Glyma.16G051100 10.0kb upstream 10.0kb upstream 10000 false Chr16: 4898220-4908219 Glycine max
Glyma.16G051100 10.0kb downstream 10.0kb downstream 11941 true Chr16: 4886279-4898219 Glycine max
Glyma.16G051100 10.0kb downstream 10.0kb downstream 10000 false Chr16: 4886279-4896278 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313301 5265 Fabidae View MSA
124072199 5270 Rosid View MSA
123753160 5271 Pentapetalae View MSA
122789185 5272 Eudicot View MSA
122049242 5273 Angiosperm View MSA
121351638 5274 Embryophyte View MSA
123382256 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.87417 0.0 9.91916   Low
cufflinks 1.84655 0.0 6.59755   Low
cufflinks 3.86896 0.0 12.8782    
cufflinks 28.0192 0.0 75.1245 High High
cufflinks 13.7019 0.0 38.6266    
cufflinks 13.668 0.0 38.4872    
cufflinks 9.8514 0.0 28.8629    
cufflinks 28.3256 0.0 75.8942 High High
cufflinks 15.999 0.0 44.3064    
cufflinks 1.121        
cufflinks 2.301        
cufflinks 3.23        
cufflinks 8.118     High High
cufflinks 5.474       High
cufflinks 0.176       Low
cufflinks 0.364       Low
cufflinks 1.85        
cufflinks 5.782       High
cufflinks 0.626        
cufflinks 0.559        
cufflinks 1.476        
cufflinks 0.507        
cufflinks 0.247       Low
cufflinks 1.919        
cufflinks 0.289       Low
cufflinks 1.855        

0 Strain