Gene : Glyma.16G052700 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR12460//PTHR12460:SF6 - CYCLIN-DEPENDENT KINASE INHIBITOR-RELATED PROTEIN Genomic Order:  527
Name:  ? Glyma.16G052700 Secondary Identifier:  ? PAC:30561709
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.16G052700 0.5kb upstream 0.5kb upstream 16601 true Chr16: 5072712-5089312 Glycine max
Glyma.16G052700 0.5kb upstream 0.5kb upstream 500 false Chr16: 5072712-5073211 Glycine max
Glyma.16G052700 0.5kb downstream 0.5kb downstream 16601 true Chr16: 5073212-5089812 Glycine max
Glyma.16G052700 0.5kb downstream 0.5kb downstream 500 false Chr16: 5089313-5089812 Glycine max
Glyma.16G052700 1.0kb upstream 1.0kb upstream 17101 true Chr16: 5072212-5089312 Glycine max
Glyma.16G052700 1.0kb upstream 1.0kb upstream 1000 false Chr16: 5072212-5073211 Glycine max
Glyma.16G052700 1.0kb downstream 1.0kb downstream 17101 true Chr16: 5073212-5090312 Glycine max
Glyma.16G052700 1.0kb downstream 1.0kb downstream 1000 false Chr16: 5089313-5090312 Glycine max
Glyma.16G052700 2.0kb upstream 2.0kb upstream 18101 true Chr16: 5071212-5089312 Glycine max
Glyma.16G052700 2.0kb upstream 2.0kb upstream 2000 false Chr16: 5071212-5073211 Glycine max
Glyma.16G052700 2.0kb downstream 2.0kb downstream 18101 true Chr16: 5073212-5091312 Glycine max
Glyma.16G052700 2.0kb downstream 2.0kb downstream 2000 false Chr16: 5089313-5091312 Glycine max
Glyma.16G052700 5.0kb upstream 5.0kb upstream 21101 true Chr16: 5068212-5089312 Glycine max
Glyma.16G052700 5.0kb upstream 5.0kb upstream 5000 false Chr16: 5068212-5073211 Glycine max
Glyma.16G052700 5.0kb downstream 5.0kb downstream 21101 true Chr16: 5073212-5094312 Glycine max
Glyma.16G052700 5.0kb downstream 5.0kb downstream 5000 false Chr16: 5089313-5094312 Glycine max
Glyma.16G052700 10.0kb upstream 10.0kb upstream 26101 true Chr16: 5063212-5089312 Glycine max
Glyma.16G052700 10.0kb upstream 10.0kb upstream 10000 false Chr16: 5063212-5073211 Glycine max
Glyma.16G052700 10.0kb downstream 10.0kb downstream 26101 true Chr16: 5073212-5099312 Glycine max
Glyma.16G052700 10.0kb downstream 10.0kb downstream 10000 false Chr16: 5089313-5099312 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303689 5265 Fabidae View MSA
124068359 5270 Rosid View MSA
123750470 5271 Pentapetalae View MSA
122797327 5272 Eudicot View MSA
122049571 5273 Angiosperm View MSA
123428880 5275 Viridiplantae View MSA
121348039 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.85015 0.0 27.6676   High
cufflinks 9.38237 0.0 27.2947   High
cufflinks 6.81128 0.0 20.555    
cufflinks 6.30759 0.0 19.1542    
cufflinks 6.24018 0.0 19.0781    
cufflinks 4.10524 0.0 13.7698   Low
cufflinks 8.84877 0.0 28.5928   High
cufflinks 6.91226 0.0 20.5903    
cufflinks 5.29073 0.0 16.6957    
cufflinks 0.472        
cufflinks 0.383       Low
cufflinks 0.561        
cufflinks 0.492        
cufflinks 0.506        
cufflinks 0.55        
cufflinks 0.619        
cufflinks 0.836       High
cufflinks 0.457        
cufflinks 0.99       High
cufflinks 0.524        
cufflinks 0.333       Low
cufflinks 0.646        
cufflinks 0.746       High
cufflinks 0.344       Low
cufflinks 0.596        
cufflinks 0.446        

0 Strain