Gene : Glyma.16G053000 G. max Wm82.a2.v1
Defline:  (1 of 118) PF03514 - GRAS domain family (GRAS) Genomic Order:  530
Name:  ? Glyma.16G053000 Secondary Identifier:  ? PAC:30559531
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.16G053000 0.5kb upstream 0.5kb upstream 3921 true Chr16: 5124089-5128009 Glycine max
Glyma.16G053000 0.5kb upstream 0.5kb upstream 500 false Chr16: 5127510-5128009 Glycine max
Glyma.16G053000 0.5kb downstream 0.5kb downstream 3921 true Chr16: 5123589-5127509 Glycine max
Glyma.16G053000 0.5kb downstream 0.5kb downstream 500 false Chr16: 5123589-5124088 Glycine max
Glyma.16G053000 1.0kb upstream 1.0kb upstream 4421 true Chr16: 5124089-5128509 Glycine max
Glyma.16G053000 1.0kb upstream 1.0kb upstream 1000 false Chr16: 5127510-5128509 Glycine max
Glyma.16G053000 1.0kb downstream 1.0kb downstream 4421 true Chr16: 5123089-5127509 Glycine max
Glyma.16G053000 1.0kb downstream 1.0kb downstream 1000 false Chr16: 5123089-5124088 Glycine max
Glyma.16G053000 2.0kb upstream 2.0kb upstream 5421 true Chr16: 5124089-5129509 Glycine max
Glyma.16G053000 2.0kb upstream 2.0kb upstream 2000 false Chr16: 5127510-5129509 Glycine max
Glyma.16G053000 2.0kb downstream 2.0kb downstream 5421 true Chr16: 5122089-5127509 Glycine max
Glyma.16G053000 2.0kb downstream 2.0kb downstream 2000 false Chr16: 5122089-5124088 Glycine max
Glyma.16G053000 5.0kb upstream 5.0kb upstream 8421 true Chr16: 5124089-5132509 Glycine max
Glyma.16G053000 5.0kb upstream 5.0kb upstream 5000 false Chr16: 5127510-5132509 Glycine max
Glyma.16G053000 5.0kb downstream 5.0kb downstream 8421 true Chr16: 5119089-5127509 Glycine max
Glyma.16G053000 5.0kb downstream 5.0kb downstream 5000 false Chr16: 5119089-5124088 Glycine max
Glyma.16G053000 10.0kb upstream 10.0kb upstream 13421 true Chr16: 5124089-5137509 Glycine max
Glyma.16G053000 10.0kb upstream 10.0kb upstream 10000 false Chr16: 5127510-5137509 Glycine max
Glyma.16G053000 10.0kb downstream 10.0kb downstream 13421 true Chr16: 5114089-5127509 Glycine max
Glyma.16G053000 10.0kb downstream 10.0kb downstream 10000 false Chr16: 5114089-5124088 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309536 5265 Fabidae View MSA
124069982 5270 Rosid View MSA
123747383 5271 Pentapetalae View MSA
122797563 5272 Eudicot View MSA
122051595 5273 Angiosperm View MSA
121350442 5274 Embryophyte View MSA
123381734 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.252935 0.0 0.953282   High
cufflinks 0.0850333 0.0 0.335797 Low  
cufflinks 0.0502612 0.0 0.202573 Low  
cufflinks 0.114198 0.0 0.445793 Low  
cufflinks 0.00765077 0.0 0.0351489 Low Low
cufflinks 0.0173803 0.0 0.0744838 Low  
cufflinks 0.149765 0.0 0.576592 Low  
cufflinks 0.00931271 0.0 0.042149 Low Low
cufflinks 0.0187464 0.0 0.0798944 Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.006     Low Low
cufflinks 0.06     Low  
cufflinks 0.01     Low  
cufflinks 0.004     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.056     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.088     Low High
cufflinks 0.022     Low  
cufflinks 0.022     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.016     Low  
cufflinks 0.075     Low High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.026     Low  
cufflinks 0.0     Not Expressed Not Expressed

0 Strain