Gene : Glyma.16G053400 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR11937:SF37 - ACTIN-RELATED PROTEIN 2 Genomic Order:  534
Name:  ? Glyma.16G053400 Secondary Identifier:  ? PAC:30561488
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.16G053400 0.5kb upstream 0.5kb upstream 9426 true Chr16: 5187313-5196738 Glycine max
Glyma.16G053400 0.5kb upstream 0.5kb upstream 500 false Chr16: 5196239-5196738 Glycine max
Glyma.16G053400 0.5kb downstream 0.5kb downstream 9426 true Chr16: 5186813-5196238 Glycine max
Glyma.16G053400 0.5kb downstream 0.5kb downstream 500 false Chr16: 5186813-5187312 Glycine max
Glyma.16G053400 1.0kb upstream 1.0kb upstream 9926 true Chr16: 5187313-5197238 Glycine max
Glyma.16G053400 1.0kb upstream 1.0kb upstream 1000 false Chr16: 5196239-5197238 Glycine max
Glyma.16G053400 1.0kb downstream 1.0kb downstream 9926 true Chr16: 5186313-5196238 Glycine max
Glyma.16G053400 1.0kb downstream 1.0kb downstream 1000 false Chr16: 5186313-5187312 Glycine max
Glyma.16G053400 2.0kb upstream 2.0kb upstream 10926 true Chr16: 5187313-5198238 Glycine max
Glyma.16G053400 2.0kb upstream 2.0kb upstream 2000 false Chr16: 5196239-5198238 Glycine max
Glyma.16G053400 2.0kb downstream 2.0kb downstream 10926 true Chr16: 5185313-5196238 Glycine max
Glyma.16G053400 2.0kb downstream 2.0kb downstream 2000 false Chr16: 5185313-5187312 Glycine max
Glyma.16G053400 5.0kb upstream 5.0kb upstream 13926 true Chr16: 5187313-5201238 Glycine max
Glyma.16G053400 5.0kb upstream 5.0kb upstream 5000 false Chr16: 5196239-5201238 Glycine max
Glyma.16G053400 5.0kb downstream 5.0kb downstream 13926 true Chr16: 5182313-5196238 Glycine max
Glyma.16G053400 5.0kb downstream 5.0kb downstream 5000 false Chr16: 5182313-5187312 Glycine max
Glyma.16G053400 10.0kb upstream 10.0kb upstream 18926 true Chr16: 5187313-5206238 Glycine max
Glyma.16G053400 10.0kb upstream 10.0kb upstream 10000 false Chr16: 5196239-5206238 Glycine max
Glyma.16G053400 10.0kb downstream 10.0kb downstream 18926 true Chr16: 5177313-5196238 Glycine max
Glyma.16G053400 10.0kb downstream 10.0kb downstream 10000 false Chr16: 5177313-5187312 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304258 5265 Fabidae View MSA
124067295 5270 Rosid View MSA
123737633 5271 Pentapetalae View MSA
122790443 5272 Eudicot View MSA
122042440 5273 Angiosperm View MSA
121345290 5274 Embryophyte View MSA
123424691 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.2895 0.0 12.686   Low
cufflinks 5.47562 0.0 15.6982    
cufflinks 3.81756 0.0 11.4275   Low
cufflinks 6.96074 0.0 19.425    
cufflinks 7.65059 0.0 21.1842    
cufflinks 7.32135 0.0 20.3393    
cufflinks 10.3354 0.0 28.0233   High
cufflinks 8.03337 0.0 22.1523    
cufflinks 6.08729 0.0 17.222    
cufflinks 1.509       High
cufflinks 0.315       Low
cufflinks 0.805        
cufflinks 1.556       High
cufflinks 1.934       High
cufflinks 0.572        
cufflinks 0.868        
cufflinks 0.589        
cufflinks 1.108        
cufflinks 1.386       High
cufflinks 0.832        
cufflinks 0.428       Low
cufflinks 0.832        
cufflinks 0.859        
cufflinks 0.338       Low
cufflinks 0.746        
cufflinks 0.522        

0 Strain