Gene : Glyma.16G056300 G. max Wm82.a2.v1
Defline:  (1 of 7) 1.17.4.1 - Ribonucleoside-diphosphate reductase / Ribonucleotide reductase Genomic Order:  563
Name:  ? Glyma.16G056300 Secondary Identifier:  ? PAC:30559536
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Sequence Feature Displayer

Ontology Annotation Displayer

12 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-6126 Glycine max pathologic  
Gmax PWY-6545 Glycine max pathologic  
Gmax PWY-7184 Glycine max pathologic  
Gmax PWY-7210 Glycine max pathologic  
Gmax PWY-7211 Glycine max pathologic  
Gmax PWY-7220 Glycine max pathologic  
Gmax PWY-7222 Glycine max pathologic  
Gmax PWY-7226 Glycine max pathologic  
Gmax PWY-7227 Glycine max pathologic  
Gmax PWY-7228 Glycine max pathologic  
Gmax PWY-7229 Glycine max pathologic  
Gmax PWY-841 Glycine max pathologic  

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.16G056300 0.5kb upstream 0.5kb upstream 2126 true Chr16: 5525909-5528034 Glycine max
Glyma.16G056300 0.5kb upstream 0.5kb upstream 500 false Chr16: 5527535-5528034 Glycine max
Glyma.16G056300 0.5kb downstream 0.5kb downstream 2126 true Chr16: 5525409-5527534 Glycine max
Glyma.16G056300 0.5kb downstream 0.5kb downstream 500 false Chr16: 5525409-5525908 Glycine max
Glyma.16G056300 1.0kb upstream 1.0kb upstream 2626 true Chr16: 5525909-5528534 Glycine max
Glyma.16G056300 1.0kb upstream 1.0kb upstream 1000 false Chr16: 5527535-5528534 Glycine max
Glyma.16G056300 1.0kb downstream 1.0kb downstream 2626 true Chr16: 5524909-5527534 Glycine max
Glyma.16G056300 1.0kb downstream 1.0kb downstream 1000 false Chr16: 5524909-5525908 Glycine max
Glyma.16G056300 2.0kb upstream 2.0kb upstream 3626 true Chr16: 5525909-5529534 Glycine max
Glyma.16G056300 2.0kb upstream 2.0kb upstream 2000 false Chr16: 5527535-5529534 Glycine max
Glyma.16G056300 2.0kb downstream 2.0kb downstream 3626 true Chr16: 5523909-5527534 Glycine max
Glyma.16G056300 2.0kb downstream 2.0kb downstream 2000 false Chr16: 5523909-5525908 Glycine max
Glyma.16G056300 5.0kb upstream 5.0kb upstream 6626 true Chr16: 5525909-5532534 Glycine max
Glyma.16G056300 5.0kb upstream 5.0kb upstream 5000 false Chr16: 5527535-5532534 Glycine max
Glyma.16G056300 5.0kb downstream 5.0kb downstream 6626 true Chr16: 5520909-5527534 Glycine max
Glyma.16G056300 5.0kb downstream 5.0kb downstream 5000 false Chr16: 5520909-5525908 Glycine max
Glyma.16G056300 10.0kb upstream 10.0kb upstream 11626 true Chr16: 5525909-5537534 Glycine max
Glyma.16G056300 10.0kb upstream 10.0kb upstream 10000 false Chr16: 5527535-5537534 Glycine max
Glyma.16G056300 10.0kb downstream 10.0kb downstream 11626 true Chr16: 5515909-5527534 Glycine max
Glyma.16G056300 10.0kb downstream 10.0kb downstream 10000 false Chr16: 5515909-5525908 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309353 5265 Fabidae View MSA
124067883 5270 Rosid View MSA
123737275 5271 Pentapetalae View MSA
122787137 5272 Eudicot View MSA
122041688 5273 Angiosperm View MSA
121344906 5274 Embryophyte View MSA
123428543 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.38427 0.0 4.92075   Low
cufflinks 20.6397 0.0 55.2964 High High
cufflinks 1.3392 0.0 4.79375   Low
cufflinks 7.01135 0.0 20.5094    
cufflinks 12.5361 0.0 34.2873    
cufflinks 7.96675 0.0 22.8473    
cufflinks 5.441 0.0 16.3589    
cufflinks 11.4942 0.0 31.8327    
cufflinks 14.1332 0.0 38.4743    
cufflinks 7.042        
cufflinks 25.532     High  
cufflinks 3.771       Low
cufflinks 10.489     High  
cufflinks 10.274     High  
cufflinks 90.589     High High
cufflinks 7.558     High  
cufflinks 3.22       Low
cufflinks 2.594       Low
cufflinks 12.641     High  
cufflinks 5.787        
cufflinks 34.672     High High
cufflinks 7.227     High  
cufflinks 18.379     High  
cufflinks 9.009     High  
cufflinks 5.941        
cufflinks 30.613     High High

0 Strain