Gene : Glyma.16G041500 G. max Wm82.a2.v1
Defline:  (1 of 1) PTHR11909:SF131 - CASEIN KINASE-LIKE PROTEIN-RELATED Genomic Order:  415
Name:  ? Glyma.16G041500 Secondary Identifier:  ? PAC:30559935
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.16G041500 0.5kb upstream 0.5kb upstream 8441 true Chr16: 3888459-3896899 Glycine max
Glyma.16G041500 0.5kb upstream 0.5kb upstream 500 false Chr16: 3896400-3896899 Glycine max
Glyma.16G041500 0.5kb downstream 0.5kb downstream 8441 true Chr16: 3887959-3896399 Glycine max
Glyma.16G041500 0.5kb downstream 0.5kb downstream 500 false Chr16: 3887959-3888458 Glycine max
Glyma.16G041500 1.0kb upstream 1.0kb upstream 8941 true Chr16: 3888459-3897399 Glycine max
Glyma.16G041500 1.0kb upstream 1.0kb upstream 1000 false Chr16: 3896400-3897399 Glycine max
Glyma.16G041500 1.0kb downstream 1.0kb downstream 8941 true Chr16: 3887459-3896399 Glycine max
Glyma.16G041500 1.0kb downstream 1.0kb downstream 1000 false Chr16: 3887459-3888458 Glycine max
Glyma.16G041500 2.0kb upstream 2.0kb upstream 9941 true Chr16: 3888459-3898399 Glycine max
Glyma.16G041500 2.0kb upstream 2.0kb upstream 2000 false Chr16: 3896400-3898399 Glycine max
Glyma.16G041500 2.0kb downstream 2.0kb downstream 9941 true Chr16: 3886459-3896399 Glycine max
Glyma.16G041500 2.0kb downstream 2.0kb downstream 2000 false Chr16: 3886459-3888458 Glycine max
Glyma.16G041500 5.0kb upstream 5.0kb upstream 12941 true Chr16: 3888459-3901399 Glycine max
Glyma.16G041500 5.0kb upstream 5.0kb upstream 5000 false Chr16: 3896400-3901399 Glycine max
Glyma.16G041500 5.0kb downstream 5.0kb downstream 12941 true Chr16: 3883459-3896399 Glycine max
Glyma.16G041500 5.0kb downstream 5.0kb downstream 5000 false Chr16: 3883459-3888458 Glycine max
Glyma.16G041500 10.0kb upstream 10.0kb upstream 17941 true Chr16: 3888459-3906399 Glycine max
Glyma.16G041500 10.0kb upstream 10.0kb upstream 10000 false Chr16: 3896400-3906399 Glycine max
Glyma.16G041500 10.0kb downstream 10.0kb downstream 17941 true Chr16: 3878459-3896399 Glycine max
Glyma.16G041500 10.0kb downstream 10.0kb downstream 10000 false Chr16: 3878459-3888458 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041344 5273 Angiosperm View MSA
122308851 5265 Fabidae View MSA
124066133 5270 Rosid View MSA
123749294 5271 Pentapetalae View MSA
122796598 5272 Eudicot View MSA
121309833 5274 Embryophyte View MSA
123427857 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 30.9451 0.0 88.8453 High  
cufflinks 22.986 0.0 63.7752 High  
cufflinks 20.7938 0.0 57.3633 High Low
cufflinks 27.7156 0.0 78.5854 High  
cufflinks 30.822 0.0 88.425 High  
cufflinks 40.6311 0.0 121.261 High High
cufflinks 25.7073 0.0 72.186 High  
cufflinks 32.7062 0.0 94.5714 High  
cufflinks 24.1337 0.0 67.3337 High  
cufflinks 14.93     High  
cufflinks 15.424     High  
cufflinks 10.681     High Low
cufflinks 16.564     High  
cufflinks 15.128     High  
cufflinks 9.316     High Low
cufflinks 13.049     High  
cufflinks 12.82     High  
cufflinks 12.002     High  
cufflinks 13.726     High  
cufflinks 12.461     High  
cufflinks 16.791     High  
cufflinks 14.528     High  
cufflinks 10.028     High Low
cufflinks 20.615     High High
cufflinks 12.721     High  
cufflinks 22.627     High High

0 Strain