Gene : Glyma.16G044800 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR19919 - WD REPEAT CONTAINING PROTEIN Genomic Order:  448
Name:  ? Glyma.16G044800 Secondary Identifier:  ? PAC:30559566
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.16G044800 0.5kb upstream 0.5kb upstream 2281 true Chr16: 4250906-4253186 Glycine max
Glyma.16G044800 0.5kb upstream 0.5kb upstream 500 false Chr16: 4250906-4251405 Glycine max
Glyma.16G044800 0.5kb downstream 0.5kb downstream 2281 true Chr16: 4251406-4253686 Glycine max
Glyma.16G044800 0.5kb downstream 0.5kb downstream 500 false Chr16: 4253187-4253686 Glycine max
Glyma.16G044800 1.0kb upstream 1.0kb upstream 2781 true Chr16: 4250406-4253186 Glycine max
Glyma.16G044800 1.0kb upstream 1.0kb upstream 1000 false Chr16: 4250406-4251405 Glycine max
Glyma.16G044800 1.0kb downstream 1.0kb downstream 2781 true Chr16: 4251406-4254186 Glycine max
Glyma.16G044800 1.0kb downstream 1.0kb downstream 1000 false Chr16: 4253187-4254186 Glycine max
Glyma.16G044800 2.0kb upstream 2.0kb upstream 3781 true Chr16: 4249406-4253186 Glycine max
Glyma.16G044800 2.0kb upstream 2.0kb upstream 2000 false Chr16: 4249406-4251405 Glycine max
Glyma.16G044800 2.0kb downstream 2.0kb downstream 3781 true Chr16: 4251406-4255186 Glycine max
Glyma.16G044800 2.0kb downstream 2.0kb downstream 2000 false Chr16: 4253187-4255186 Glycine max
Glyma.16G044800 5.0kb upstream 5.0kb upstream 6781 true Chr16: 4246406-4253186 Glycine max
Glyma.16G044800 5.0kb upstream 5.0kb upstream 5000 false Chr16: 4246406-4251405 Glycine max
Glyma.16G044800 5.0kb downstream 5.0kb downstream 6781 true Chr16: 4251406-4258186 Glycine max
Glyma.16G044800 5.0kb downstream 5.0kb downstream 5000 false Chr16: 4253187-4258186 Glycine max
Glyma.16G044800 10.0kb upstream 10.0kb upstream 11781 true Chr16: 4241406-4253186 Glycine max
Glyma.16G044800 10.0kb upstream 10.0kb upstream 10000 false Chr16: 4241406-4251405 Glycine max
Glyma.16G044800 10.0kb downstream 10.0kb downstream 11781 true Chr16: 4251406-4263186 Glycine max
Glyma.16G044800 10.0kb downstream 10.0kb downstream 10000 false Chr16: 4253187-4263186 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306354 5265 Fabidae View MSA
124065960 5270 Rosid View MSA
123745660 5271 Pentapetalae View MSA
122791660 5272 Eudicot View MSA
122050418 5273 Angiosperm View MSA
121348109 5274 Embryophyte View MSA
123423806 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.8385 0.0 34.5409    
cufflinks 12.9445 0.0 34.8661    
cufflinks 7.61628 0.0 21.3768   Low
cufflinks 11.6804 0.0 31.6069    
cufflinks 14.4318 0.0 38.6176    
cufflinks 15.7586 0.0 42.1147   High
cufflinks 17.0176 0.0 45.4293   High
cufflinks 9.21547 0.0 25.3187   Low
cufflinks 11.5222 0.0 31.1619    
cufflinks 5.456        
cufflinks 1.232       Low
cufflinks 4.69        
cufflinks 9.242     High  
cufflinks 7.982     High  
cufflinks 4.012        
cufflinks 8.62     High  
cufflinks 1.799       Low
cufflinks 5.618        
cufflinks 11.892     High High
cufflinks 8.326     High  
cufflinks 1.594       Low
cufflinks 8.436     High  
cufflinks 9.22     High  
cufflinks 1.607       Low
cufflinks 7.874     High  
cufflinks 2.476        

0 Strain