Gene : Glyma.16G045000 G. max Wm82.a2.v1
Defline:  (1 of 6) PTHR31062:SF15 - XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE PROTEIN 4-RELATED Genomic Order:  450
Name:  ? Glyma.16G045000 Secondary Identifier:  ? PAC:30561103
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.16G045000 0.5kb upstream 0.5kb upstream 2839 true Chr16: 4272035-4274873 Glycine max
Glyma.16G045000 0.5kb upstream 0.5kb upstream 500 false Chr16: 4274374-4274873 Glycine max
Glyma.16G045000 0.5kb downstream 0.5kb downstream 2839 true Chr16: 4271535-4274373 Glycine max
Glyma.16G045000 0.5kb downstream 0.5kb downstream 500 false Chr16: 4271535-4272034 Glycine max
Glyma.16G045000 1.0kb upstream 1.0kb upstream 3339 true Chr16: 4272035-4275373 Glycine max
Glyma.16G045000 1.0kb upstream 1.0kb upstream 1000 false Chr16: 4274374-4275373 Glycine max
Glyma.16G045000 1.0kb downstream 1.0kb downstream 3339 true Chr16: 4271035-4274373 Glycine max
Glyma.16G045000 1.0kb downstream 1.0kb downstream 1000 false Chr16: 4271035-4272034 Glycine max
Glyma.16G045000 2.0kb upstream 2.0kb upstream 4339 true Chr16: 4272035-4276373 Glycine max
Glyma.16G045000 2.0kb upstream 2.0kb upstream 2000 false Chr16: 4274374-4276373 Glycine max
Glyma.16G045000 2.0kb downstream 2.0kb downstream 4339 true Chr16: 4270035-4274373 Glycine max
Glyma.16G045000 2.0kb downstream 2.0kb downstream 2000 false Chr16: 4270035-4272034 Glycine max
Glyma.16G045000 5.0kb upstream 5.0kb upstream 7339 true Chr16: 4272035-4279373 Glycine max
Glyma.16G045000 5.0kb upstream 5.0kb upstream 5000 false Chr16: 4274374-4279373 Glycine max
Glyma.16G045000 5.0kb downstream 5.0kb downstream 7339 true Chr16: 4267035-4274373 Glycine max
Glyma.16G045000 5.0kb downstream 5.0kb downstream 5000 false Chr16: 4267035-4272034 Glycine max
Glyma.16G045000 10.0kb upstream 10.0kb upstream 12339 true Chr16: 4272035-4284373 Glycine max
Glyma.16G045000 10.0kb upstream 10.0kb upstream 10000 false Chr16: 4274374-4284373 Glycine max
Glyma.16G045000 10.0kb downstream 10.0kb downstream 12339 true Chr16: 4262035-4274373 Glycine max
Glyma.16G045000 10.0kb downstream 10.0kb downstream 10000 false Chr16: 4262035-4272034 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310000 5265 Fabidae View MSA
124063834 5270 Rosid View MSA
123740091 5271 Pentapetalae View MSA
122795119 5272 Eudicot View MSA
122042139 5273 Angiosperm View MSA
121350333 5274 Embryophyte View MSA
123381682 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.28861 0.0 7.66592   Low
cufflinks 83.5928 0.0 242.367 High  
cufflinks 167.623 0.0 548.06 High  
cufflinks 58.8117 0.0 163.928 High  
cufflinks 234.122 0.0 828.897 High  
cufflinks 182.724 0.0 609.151 High  
cufflinks 7.14862 0.0 20.4833   Low
cufflinks 108.658 0.0 328.526 High  
cufflinks 91.7198 0.0 270.197 High  
cufflinks 119.87     High High
cufflinks 12.2     High Low
cufflinks 102.697     High High
cufflinks 172.588     High High
cufflinks 187.608     High High
cufflinks 43.738     High  
cufflinks 32.854     High  
cufflinks 35.956     High  
cufflinks 73.576     High  
cufflinks 34.24     High  
cufflinks 21.566     High  
cufflinks 18.992     High  
cufflinks 24.543     High  
cufflinks 42.783     High  
cufflinks 4.87       Low
cufflinks 24.364     High  
cufflinks 40.367     High  

0 Strain