Gene : Glyma.16G045800 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR16007//PTHR16007:SF13 - EPIDIDYMAL MEMBRANE PROTEIN E9-RELATED Genomic Order:  458
Name:  ? Glyma.16G045800 Secondary Identifier:  ? PAC:30559708
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.16G045800 0.5kb upstream 0.5kb upstream 2647 true Chr16: 4340643-4343289 Glycine max
Glyma.16G045800 0.5kb upstream 0.5kb upstream 500 false Chr16: 4342790-4343289 Glycine max
Glyma.16G045800 0.5kb downstream 0.5kb downstream 2647 true Chr16: 4340143-4342789 Glycine max
Glyma.16G045800 0.5kb downstream 0.5kb downstream 500 false Chr16: 4340143-4340642 Glycine max
Glyma.16G045800 1.0kb upstream 1.0kb upstream 3147 true Chr16: 4340643-4343789 Glycine max
Glyma.16G045800 1.0kb upstream 1.0kb upstream 1000 false Chr16: 4342790-4343789 Glycine max
Glyma.16G045800 1.0kb downstream 1.0kb downstream 3147 true Chr16: 4339643-4342789 Glycine max
Glyma.16G045800 1.0kb downstream 1.0kb downstream 1000 false Chr16: 4339643-4340642 Glycine max
Glyma.16G045800 2.0kb upstream 2.0kb upstream 4147 true Chr16: 4340643-4344789 Glycine max
Glyma.16G045800 2.0kb upstream 2.0kb upstream 2000 false Chr16: 4342790-4344789 Glycine max
Glyma.16G045800 2.0kb downstream 2.0kb downstream 4147 true Chr16: 4338643-4342789 Glycine max
Glyma.16G045800 2.0kb downstream 2.0kb downstream 2000 false Chr16: 4338643-4340642 Glycine max
Glyma.16G045800 5.0kb upstream 5.0kb upstream 7147 true Chr16: 4340643-4347789 Glycine max
Glyma.16G045800 5.0kb upstream 5.0kb upstream 5000 false Chr16: 4342790-4347789 Glycine max
Glyma.16G045800 5.0kb downstream 5.0kb downstream 7147 true Chr16: 4335643-4342789 Glycine max
Glyma.16G045800 5.0kb downstream 5.0kb downstream 5000 false Chr16: 4335643-4340642 Glycine max
Glyma.16G045800 10.0kb upstream 10.0kb upstream 12147 true Chr16: 4340643-4352789 Glycine max
Glyma.16G045800 10.0kb upstream 10.0kb upstream 10000 false Chr16: 4342790-4352789 Glycine max
Glyma.16G045800 10.0kb downstream 10.0kb downstream 12147 true Chr16: 4330643-4342789 Glycine max
Glyma.16G045800 10.0kb downstream 10.0kb downstream 10000 false Chr16: 4330643-4340642 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041247 5273 Angiosperm View MSA
122307294 5265 Fabidae View MSA
124063633 5270 Rosid View MSA
123742298 5271 Pentapetalae View MSA
122794517 5272 Eudicot View MSA
121344205 5274 Embryophyte View MSA
123380001 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.33525 0.0 7.65235    
cufflinks 2.40904 0.0 7.85746    
cufflinks 1.43916 0.0 4.99377   Low
cufflinks 4.57519 0.0 13.6283   High
cufflinks 3.54377 0.0 10.8916    
cufflinks 2.65165 0.0 8.51337    
cufflinks 2.86849 0.0 9.11521    
cufflinks 3.64058 0.0 11.2017    
cufflinks 1.98409 0.0 6.61792    
cufflinks 1.689       High
cufflinks 0.705        
cufflinks 0.897        
cufflinks 0.81        
cufflinks 1.501       High
cufflinks 0.421       Low
cufflinks 0.56        
cufflinks 0.885        
cufflinks 1.834       High
cufflinks 1.135        
cufflinks 0.616        
cufflinks 0.489       Low
cufflinks 0.665        
cufflinks 1.089        
cufflinks 0.602        
cufflinks 0.57        
cufflinks 0.709        

0 Strain