Gene : Glyma.16G046000 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR14025:SF21 - DEAD/DEAH BOX HELICASE-RELATED Genomic Order:  460
Name:  ? Glyma.16G046000 Secondary Identifier:  ? PAC:30561882
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.16G046000 0.5kb upstream 0.5kb upstream 12764 true Chr16: 4348258-4361021 Glycine max
Glyma.16G046000 0.5kb upstream 0.5kb upstream 500 false Chr16: 4360522-4361021 Glycine max
Glyma.16G046000 0.5kb downstream 0.5kb downstream 12764 true Chr16: 4347758-4360521 Glycine max
Glyma.16G046000 0.5kb downstream 0.5kb downstream 500 false Chr16: 4347758-4348257 Glycine max
Glyma.16G046000 1.0kb upstream 1.0kb upstream 13264 true Chr16: 4348258-4361521 Glycine max
Glyma.16G046000 1.0kb upstream 1.0kb upstream 1000 false Chr16: 4360522-4361521 Glycine max
Glyma.16G046000 1.0kb downstream 1.0kb downstream 13264 true Chr16: 4347258-4360521 Glycine max
Glyma.16G046000 1.0kb downstream 1.0kb downstream 1000 false Chr16: 4347258-4348257 Glycine max
Glyma.16G046000 2.0kb upstream 2.0kb upstream 14264 true Chr16: 4348258-4362521 Glycine max
Glyma.16G046000 2.0kb upstream 2.0kb upstream 2000 false Chr16: 4360522-4362521 Glycine max
Glyma.16G046000 2.0kb downstream 2.0kb downstream 14264 true Chr16: 4346258-4360521 Glycine max
Glyma.16G046000 2.0kb downstream 2.0kb downstream 2000 false Chr16: 4346258-4348257 Glycine max
Glyma.16G046000 5.0kb upstream 5.0kb upstream 17264 true Chr16: 4348258-4365521 Glycine max
Glyma.16G046000 5.0kb upstream 5.0kb upstream 5000 false Chr16: 4360522-4365521 Glycine max
Glyma.16G046000 5.0kb downstream 5.0kb downstream 17264 true Chr16: 4343258-4360521 Glycine max
Glyma.16G046000 5.0kb downstream 5.0kb downstream 5000 false Chr16: 4343258-4348257 Glycine max
Glyma.16G046000 10.0kb upstream 10.0kb upstream 22264 true Chr16: 4348258-4370521 Glycine max
Glyma.16G046000 10.0kb upstream 10.0kb upstream 10000 false Chr16: 4360522-4370521 Glycine max
Glyma.16G046000 10.0kb downstream 10.0kb downstream 22264 true Chr16: 4338258-4360521 Glycine max
Glyma.16G046000 10.0kb downstream 10.0kb downstream 10000 false Chr16: 4338258-4348257 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299787 5265 Fabidae View MSA
124064201 5270 Rosid View MSA
123751738 5271 Pentapetalae View MSA
122788297 5272 Eudicot View MSA
122045154 5273 Angiosperm View MSA
121349019 5274 Embryophyte View MSA
123425837 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 15.6715 0.0 42.6884   High
cufflinks 7.04457 0.0 18.8208    
cufflinks 8.77869 0.0 23.4271    
cufflinks 3.87085 0.0 10.6221    
cufflinks 2.34635 0.0 6.79643    
cufflinks 0.809559 0.0 2.71165   Low
cufflinks 4.36734 0.0 11.9085    
cufflinks 4.27783 0.0 11.6604    
cufflinks 1.96127 0.0 5.80327    
cufflinks 1.117        
cufflinks 0.189       Low
cufflinks 3.183        
cufflinks 0.642        
cufflinks 0.727        
cufflinks 0.378        
cufflinks 5.656       High
cufflinks 0.315        
cufflinks 2.582        
cufflinks 2.479        
cufflinks 7.176     High High
cufflinks 0.192       Low
cufflinks 7.054       High
cufflinks 5.898       High
cufflinks 0.208       Low
cufflinks 6.959     High High
cufflinks 0.211       Low

0 Strain