Gene : Glyma.16G046300 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR31677:SF5 - ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR LEP Genomic Order:  463
Name:  ? Glyma.16G046300 Secondary Identifier:  ? PAC:30559386
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.16G046300 0.5kb upstream 0.5kb upstream 1208 true Chr16: 4383851-4385058 Glycine max
Glyma.16G046300 0.5kb upstream 0.5kb upstream 500 false Chr16: 4384559-4385058 Glycine max
Glyma.16G046300 0.5kb downstream 0.5kb downstream 1208 true Chr16: 4383351-4384558 Glycine max
Glyma.16G046300 0.5kb downstream 0.5kb downstream 500 false Chr16: 4383351-4383850 Glycine max
Glyma.16G046300 1.0kb upstream 1.0kb upstream 1708 true Chr16: 4383851-4385558 Glycine max
Glyma.16G046300 1.0kb upstream 1.0kb upstream 1000 false Chr16: 4384559-4385558 Glycine max
Glyma.16G046300 1.0kb downstream 1.0kb downstream 1708 true Chr16: 4382851-4384558 Glycine max
Glyma.16G046300 1.0kb downstream 1.0kb downstream 1000 false Chr16: 4382851-4383850 Glycine max
Glyma.16G046300 2.0kb upstream 2.0kb upstream 2708 true Chr16: 4383851-4386558 Glycine max
Glyma.16G046300 2.0kb upstream 2.0kb upstream 2000 false Chr16: 4384559-4386558 Glycine max
Glyma.16G046300 2.0kb downstream 2.0kb downstream 2708 true Chr16: 4381851-4384558 Glycine max
Glyma.16G046300 2.0kb downstream 2.0kb downstream 2000 false Chr16: 4381851-4383850 Glycine max
Glyma.16G046300 5.0kb upstream 5.0kb upstream 5708 true Chr16: 4383851-4389558 Glycine max
Glyma.16G046300 5.0kb upstream 5.0kb upstream 5000 false Chr16: 4384559-4389558 Glycine max
Glyma.16G046300 5.0kb downstream 5.0kb downstream 5708 true Chr16: 4378851-4384558 Glycine max
Glyma.16G046300 5.0kb downstream 5.0kb downstream 5000 false Chr16: 4378851-4383850 Glycine max
Glyma.16G046300 10.0kb upstream 10.0kb upstream 10708 true Chr16: 4383851-4394558 Glycine max
Glyma.16G046300 10.0kb upstream 10.0kb upstream 10000 false Chr16: 4384559-4394558 Glycine max
Glyma.16G046300 10.0kb downstream 10.0kb downstream 10708 true Chr16: 4373851-4384558 Glycine max
Glyma.16G046300 10.0kb downstream 10.0kb downstream 10000 false Chr16: 4373851-4383850 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122253751 5265 Fabidae View MSA
124065469 5270 Rosid View MSA
123753503 5271 Pentapetalae View MSA
122795493 5272 Eudicot View MSA
122048706 5273 Angiosperm View MSA
123428898 5275 Viridiplantae View MSA
121351000 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0443902 0.0 0.20131 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.337357 0.0 1.33364    
cufflinks 0.395315 0.0 1.55758    
cufflinks 0.0367227 0.0 0.168198 Low  
cufflinks 0.0452599 0.0 0.204845 Low  
cufflinks 2.58088 0.0 9.33696   High
cufflinks 0.04     Low Low
cufflinks 0.543        
cufflinks 0.043     Low Low
cufflinks 0.984       High
cufflinks 0.737        
cufflinks 0.581        
cufflinks 0.023     Low Low
cufflinks 0.103        
cufflinks 0.139        
cufflinks 0.037     Low Low
cufflinks 0.048     Low  
cufflinks 1.193       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.096     Low  
cufflinks 1.007       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 1.382       High

0 Strain