Gene : Glyma.16G046700 G. max Wm82.a2.v1
Defline:  (1 of 131) PF02362 - B3 DNA binding domain (B3) Genomic Order:  467
Name:  ? Glyma.16G046700 Secondary Identifier:  ? PAC:30558965
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.16G046700 0.5kb upstream 0.5kb upstream 4613 true Chr16: 4439405-4444017 Glycine max
Glyma.16G046700 0.5kb upstream 0.5kb upstream 500 false Chr16: 4439405-4439904 Glycine max
Glyma.16G046700 0.5kb downstream 0.5kb downstream 4613 true Chr16: 4439905-4444517 Glycine max
Glyma.16G046700 0.5kb downstream 0.5kb downstream 500 false Chr16: 4444018-4444517 Glycine max
Glyma.16G046700 1.0kb upstream 1.0kb upstream 5113 true Chr16: 4438905-4444017 Glycine max
Glyma.16G046700 1.0kb upstream 1.0kb upstream 1000 false Chr16: 4438905-4439904 Glycine max
Glyma.16G046700 1.0kb downstream 1.0kb downstream 5113 true Chr16: 4439905-4445017 Glycine max
Glyma.16G046700 1.0kb downstream 1.0kb downstream 1000 false Chr16: 4444018-4445017 Glycine max
Glyma.16G046700 2.0kb upstream 2.0kb upstream 6113 true Chr16: 4437905-4444017 Glycine max
Glyma.16G046700 2.0kb upstream 2.0kb upstream 2000 false Chr16: 4437905-4439904 Glycine max
Glyma.16G046700 2.0kb downstream 2.0kb downstream 6113 true Chr16: 4439905-4446017 Glycine max
Glyma.16G046700 2.0kb downstream 2.0kb downstream 2000 false Chr16: 4444018-4446017 Glycine max
Glyma.16G046700 5.0kb upstream 5.0kb upstream 9113 true Chr16: 4434905-4444017 Glycine max
Glyma.16G046700 5.0kb upstream 5.0kb upstream 5000 false Chr16: 4434905-4439904 Glycine max
Glyma.16G046700 5.0kb downstream 5.0kb downstream 9113 true Chr16: 4439905-4449017 Glycine max
Glyma.16G046700 5.0kb downstream 5.0kb downstream 5000 false Chr16: 4444018-4449017 Glycine max
Glyma.16G046700 10.0kb upstream 10.0kb upstream 14113 true Chr16: 4429905-4444017 Glycine max
Glyma.16G046700 10.0kb upstream 10.0kb upstream 10000 false Chr16: 4429905-4439904 Glycine max
Glyma.16G046700 10.0kb downstream 10.0kb downstream 14113 true Chr16: 4439905-4454017 Glycine max
Glyma.16G046700 10.0kb downstream 10.0kb downstream 10000 false Chr16: 4444018-4454017 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313165 5265 Fabidae View MSA
124073823 5270 Rosid View MSA
123753418 5271 Pentapetalae View MSA
122797829 5272 Eudicot View MSA
122050133 5273 Angiosperm View MSA
121350826 5274 Embryophyte View MSA
123427153 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0896822 0.0 0.36005 Low  
cufflinks 0.807698 0.0 5.14275   High
cufflinks 0.125457 0.0 0.495988 Low  
cufflinks 0.502739 0.0 2.46936    
cufflinks 0.0636392 0.0 0.258647 Low  
cufflinks 0.192364 0.0 0.748675 Low  
cufflinks 1.33267 0.0 7.33534   High
cufflinks 0.0286969 0.0 0.126455 Low Low
cufflinks 0.410127 0.0 2.69144    
cufflinks 0.012     Low  
cufflinks 0.074        
cufflinks 0.09     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.058        
cufflinks 0.01     Low  
cufflinks 0.004     Low Low
cufflinks 0.142       High
cufflinks 0.472       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.077        
cufflinks 0.006     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.011     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.018     Low  

0 Strain