Gene : Glyma.16G046900 G. max Wm82.a2.v1
Defline:  (1 of 2) 3.6.1.31 - Phosphoribosyl-ATP diphosphatase / Phosphoribosyladenosine triphosphate pyrophosphatase Genomic Order:  469
Name:  ? Glyma.16G046900 Secondary Identifier:  ? PAC:30560265
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax HISTSYN-PWY Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.16G046900 0.5kb upstream 0.5kb upstream 4706 true Chr16: 4458388-4463093 Glycine max
Glyma.16G046900 0.5kb upstream 0.5kb upstream 500 false Chr16: 4458388-4458887 Glycine max
Glyma.16G046900 0.5kb downstream 0.5kb downstream 4706 true Chr16: 4458888-4463593 Glycine max
Glyma.16G046900 0.5kb downstream 0.5kb downstream 500 false Chr16: 4463094-4463593 Glycine max
Glyma.16G046900 1.0kb upstream 1.0kb upstream 5206 true Chr16: 4457888-4463093 Glycine max
Glyma.16G046900 1.0kb upstream 1.0kb upstream 1000 false Chr16: 4457888-4458887 Glycine max
Glyma.16G046900 1.0kb downstream 1.0kb downstream 5206 true Chr16: 4458888-4464093 Glycine max
Glyma.16G046900 1.0kb downstream 1.0kb downstream 1000 false Chr16: 4463094-4464093 Glycine max
Glyma.16G046900 2.0kb upstream 2.0kb upstream 6206 true Chr16: 4456888-4463093 Glycine max
Glyma.16G046900 2.0kb upstream 2.0kb upstream 2000 false Chr16: 4456888-4458887 Glycine max
Glyma.16G046900 2.0kb downstream 2.0kb downstream 6206 true Chr16: 4458888-4465093 Glycine max
Glyma.16G046900 2.0kb downstream 2.0kb downstream 2000 false Chr16: 4463094-4465093 Glycine max
Glyma.16G046900 5.0kb upstream 5.0kb upstream 9206 true Chr16: 4453888-4463093 Glycine max
Glyma.16G046900 5.0kb upstream 5.0kb upstream 5000 false Chr16: 4453888-4458887 Glycine max
Glyma.16G046900 5.0kb downstream 5.0kb downstream 9206 true Chr16: 4458888-4468093 Glycine max
Glyma.16G046900 5.0kb downstream 5.0kb downstream 5000 false Chr16: 4463094-4468093 Glycine max
Glyma.16G046900 10.0kb upstream 10.0kb upstream 14206 true Chr16: 4448888-4463093 Glycine max
Glyma.16G046900 10.0kb upstream 10.0kb upstream 10000 false Chr16: 4448888-4458887 Glycine max
Glyma.16G046900 10.0kb downstream 10.0kb downstream 14206 true Chr16: 4458888-4473093 Glycine max
Glyma.16G046900 10.0kb downstream 10.0kb downstream 10000 false Chr16: 4463094-4473093 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304181 5265 Fabidae View MSA
124060953 5270 Rosid View MSA
123746626 5271 Pentapetalae View MSA
122789417 5272 Eudicot View MSA
122047358 5273 Angiosperm View MSA
121345826 5274 Embryophyte View MSA
123423910 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 19.5382 0.0 69.4086    
cufflinks 25.6162 0.0 116.09 High  
cufflinks 9.07097 0.0 34.566   Low
cufflinks 28.2515 0.0 102.074 High  
cufflinks 22.2188 0.0 77.2535 High  
cufflinks 22.1855 0.0 78.6572    
cufflinks 37.4755 0.0 179.288 High High
cufflinks 27.8541 0.0 99.9939 High  
cufflinks 21.3427 0.0 74.3484 High  
cufflinks 2.992        
cufflinks 0.643       Low
cufflinks 1.493        
cufflinks 3.204        
cufflinks 3.831       High
cufflinks 0.757       Low
cufflinks 2.736        
cufflinks 0.96       Low
cufflinks 2.544        
cufflinks 3.241        
cufflinks 2.45        
cufflinks 1.063        
cufflinks 2.695        
cufflinks 3.303        
cufflinks 0.941       Low
cufflinks 2.582        
cufflinks 0.903       Low

0 Strain