Gene : Glyma.16G047200 G. max Wm82.a2.v1
Defline:  (1 of 19) PF05055 - Protein of unknown function (DUF677) (DUF677) Genomic Order:  472
Name:  ? Glyma.16G047200 Secondary Identifier:  ? PAC:30559918
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.16G047200 0.5kb upstream 0.5kb upstream 2478 true Chr16: 4474705-4477182 Glycine max
Glyma.16G047200 0.5kb upstream 0.5kb upstream 500 false Chr16: 4474705-4475204 Glycine max
Glyma.16G047200 0.5kb downstream 0.5kb downstream 2478 true Chr16: 4475205-4477682 Glycine max
Glyma.16G047200 0.5kb downstream 0.5kb downstream 500 false Chr16: 4477183-4477682 Glycine max
Glyma.16G047200 1.0kb upstream 1.0kb upstream 2978 true Chr16: 4474205-4477182 Glycine max
Glyma.16G047200 1.0kb upstream 1.0kb upstream 1000 false Chr16: 4474205-4475204 Glycine max
Glyma.16G047200 1.0kb downstream 1.0kb downstream 2978 true Chr16: 4475205-4478182 Glycine max
Glyma.16G047200 1.0kb downstream 1.0kb downstream 1000 false Chr16: 4477183-4478182 Glycine max
Glyma.16G047200 2.0kb upstream 2.0kb upstream 3978 true Chr16: 4473205-4477182 Glycine max
Glyma.16G047200 2.0kb upstream 2.0kb upstream 2000 false Chr16: 4473205-4475204 Glycine max
Glyma.16G047200 2.0kb downstream 2.0kb downstream 3978 true Chr16: 4475205-4479182 Glycine max
Glyma.16G047200 2.0kb downstream 2.0kb downstream 2000 false Chr16: 4477183-4479182 Glycine max
Glyma.16G047200 5.0kb upstream 5.0kb upstream 6978 true Chr16: 4470205-4477182 Glycine max
Glyma.16G047200 5.0kb upstream 5.0kb upstream 5000 false Chr16: 4470205-4475204 Glycine max
Glyma.16G047200 5.0kb downstream 5.0kb downstream 6978 true Chr16: 4475205-4482182 Glycine max
Glyma.16G047200 5.0kb downstream 5.0kb downstream 5000 false Chr16: 4477183-4482182 Glycine max
Glyma.16G047200 10.0kb upstream 10.0kb upstream 11978 true Chr16: 4465205-4477182 Glycine max
Glyma.16G047200 10.0kb upstream 10.0kb upstream 10000 false Chr16: 4465205-4475204 Glycine max
Glyma.16G047200 10.0kb downstream 10.0kb downstream 11978 true Chr16: 4475205-4487182 Glycine max
Glyma.16G047200 10.0kb downstream 10.0kb downstream 10000 false Chr16: 4477183-4487182 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302800 5265 Fabidae View MSA
124061570 5270 Rosid View MSA
123747864 5271 Pentapetalae View MSA
122792718 5272 Eudicot View MSA
122051174 5273 Angiosperm View MSA
121347879 5274 Embryophyte View MSA
123380662 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.15052 0.0 7.08158    
cufflinks 1.46774 0.0 5.06636    
cufflinks 1.09376 0.0 3.88557   Low
cufflinks 2.65009 0.0 8.5015   High
cufflinks 1.4246 0.0 4.89499    
cufflinks 2.25497 0.0 7.36373    
cufflinks 1.77605 0.0 5.97259    
cufflinks 1.9111 0.0 6.39669    
cufflinks 1.37994 0.0 4.77584    
cufflinks 0.657        
cufflinks 0.323       Low
cufflinks 0.876        
cufflinks 0.823        
cufflinks 0.781        
cufflinks 0.308       Low
cufflinks 0.726        
cufflinks 0.456        
cufflinks 1.025       High
cufflinks 1.124       High
cufflinks 0.581        
cufflinks 0.251       Low
cufflinks 0.672        
cufflinks 0.938       High
cufflinks 0.372        
cufflinks 0.571        
cufflinks 0.395        

0 Strain