Gene : Glyma.16G033100 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR12829:SF2 - N6-ADENOSINE-METHYLTRANSFERASE 70 KDA SUBUNIT Genomic Order:  331
Name:  ? Glyma.16G033100 Secondary Identifier:  ? PAC:30559252
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.16G033100 0.5kb upstream 0.5kb upstream 6116 true Chr16: 3127716-3133831 Glycine max
Glyma.16G033100 0.5kb upstream 0.5kb upstream 500 false Chr16: 3133332-3133831 Glycine max
Glyma.16G033100 0.5kb downstream 0.5kb downstream 6116 true Chr16: 3127216-3133331 Glycine max
Glyma.16G033100 0.5kb downstream 0.5kb downstream 500 false Chr16: 3127216-3127715 Glycine max
Glyma.16G033100 1.0kb upstream 1.0kb upstream 6616 true Chr16: 3127716-3134331 Glycine max
Glyma.16G033100 1.0kb upstream 1.0kb upstream 1000 false Chr16: 3133332-3134331 Glycine max
Glyma.16G033100 1.0kb downstream 1.0kb downstream 6616 true Chr16: 3126716-3133331 Glycine max
Glyma.16G033100 1.0kb downstream 1.0kb downstream 1000 false Chr16: 3126716-3127715 Glycine max
Glyma.16G033100 2.0kb upstream 2.0kb upstream 7616 true Chr16: 3127716-3135331 Glycine max
Glyma.16G033100 2.0kb upstream 2.0kb upstream 2000 false Chr16: 3133332-3135331 Glycine max
Glyma.16G033100 2.0kb downstream 2.0kb downstream 7616 true Chr16: 3125716-3133331 Glycine max
Glyma.16G033100 2.0kb downstream 2.0kb downstream 2000 false Chr16: 3125716-3127715 Glycine max
Glyma.16G033100 5.0kb upstream 5.0kb upstream 10616 true Chr16: 3127716-3138331 Glycine max
Glyma.16G033100 5.0kb upstream 5.0kb upstream 5000 false Chr16: 3133332-3138331 Glycine max
Glyma.16G033100 5.0kb downstream 5.0kb downstream 10616 true Chr16: 3122716-3133331 Glycine max
Glyma.16G033100 5.0kb downstream 5.0kb downstream 5000 false Chr16: 3122716-3127715 Glycine max
Glyma.16G033100 10.0kb upstream 10.0kb upstream 15616 true Chr16: 3127716-3143331 Glycine max
Glyma.16G033100 10.0kb upstream 10.0kb upstream 10000 false Chr16: 3133332-3143331 Glycine max
Glyma.16G033100 10.0kb downstream 10.0kb downstream 15616 true Chr16: 3117716-3133331 Glycine max
Glyma.16G033100 10.0kb downstream 10.0kb downstream 10000 false Chr16: 3117716-3127715 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303177 5265 Fabidae View MSA
124068237 5270 Rosid View MSA
123739391 5271 Pentapetalae View MSA
122790080 5272 Eudicot View MSA
122047646 5273 Angiosperm View MSA
121344121 5274 Embryophyte View MSA
123426132 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.4957 0.0 30.7203    
cufflinks 9.63049 0.0 25.6929    
cufflinks 8.29115 0.0 22.1405    
cufflinks 11.1485 0.0 29.7772    
cufflinks 9.68776 0.0 25.8459    
cufflinks 4.45383 0.0 12.2371   Low
cufflinks 24.985 0.0 70.0913 High High
cufflinks 6.52479 0.0 17.5355    
cufflinks 8.76146 0.0 23.3839    
cufflinks 3.24       Low
cufflinks 3.729       Low
cufflinks 6.617       High
cufflinks 4.796        
cufflinks 6.022        
cufflinks 4.279        
cufflinks 5.827        
cufflinks 5.299        
cufflinks 6.195        
cufflinks 6.976       High
cufflinks 5.996        
cufflinks 4.839        
cufflinks 6.459        
cufflinks 6.108        
cufflinks 3.821       Low
cufflinks 5.292        
cufflinks 4.762        

0 Strain