Gene : Glyma.16G034900 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR27002:SF17 - G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-2 Genomic Order:  349
Name:  ? Glyma.16G034900 Secondary Identifier:  ? PAC:30560319
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.16G034900 0.5kb upstream 0.5kb upstream 3375 true Chr16: 3273372-3276746 Glycine max
Glyma.16G034900 0.5kb upstream 0.5kb upstream 500 false Chr16: 3273372-3273871 Glycine max
Glyma.16G034900 0.5kb downstream 0.5kb downstream 3375 true Chr16: 3273872-3277246 Glycine max
Glyma.16G034900 0.5kb downstream 0.5kb downstream 500 false Chr16: 3276747-3277246 Glycine max
Glyma.16G034900 1.0kb upstream 1.0kb upstream 3875 true Chr16: 3272872-3276746 Glycine max
Glyma.16G034900 1.0kb upstream 1.0kb upstream 1000 false Chr16: 3272872-3273871 Glycine max
Glyma.16G034900 1.0kb downstream 1.0kb downstream 3875 true Chr16: 3273872-3277746 Glycine max
Glyma.16G034900 1.0kb downstream 1.0kb downstream 1000 false Chr16: 3276747-3277746 Glycine max
Glyma.16G034900 2.0kb upstream 2.0kb upstream 4875 true Chr16: 3271872-3276746 Glycine max
Glyma.16G034900 2.0kb upstream 2.0kb upstream 2000 false Chr16: 3271872-3273871 Glycine max
Glyma.16G034900 2.0kb downstream 2.0kb downstream 4875 true Chr16: 3273872-3278746 Glycine max
Glyma.16G034900 2.0kb downstream 2.0kb downstream 2000 false Chr16: 3276747-3278746 Glycine max
Glyma.16G034900 5.0kb upstream 5.0kb upstream 7875 true Chr16: 3268872-3276746 Glycine max
Glyma.16G034900 5.0kb upstream 5.0kb upstream 5000 false Chr16: 3268872-3273871 Glycine max
Glyma.16G034900 5.0kb downstream 5.0kb downstream 7875 true Chr16: 3273872-3281746 Glycine max
Glyma.16G034900 5.0kb downstream 5.0kb downstream 5000 false Chr16: 3276747-3281746 Glycine max
Glyma.16G034900 10.0kb upstream 10.0kb upstream 12875 true Chr16: 3263872-3276746 Glycine max
Glyma.16G034900 10.0kb upstream 10.0kb upstream 10000 false Chr16: 3263872-3273871 Glycine max
Glyma.16G034900 10.0kb downstream 10.0kb downstream 12875 true Chr16: 3273872-3286746 Glycine max
Glyma.16G034900 10.0kb downstream 10.0kb downstream 10000 false Chr16: 3276747-3286746 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303453 5265 Fabidae View MSA
124073959 5270 Rosid View MSA
123747551 5271 Pentapetalae View MSA
122797900 5272 Eudicot View MSA
122051692 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121351748 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.96397 0.0 18.648    
cufflinks 5.10571 0.0 13.8908   Low
cufflinks 7.46682 0.0 19.9736    
cufflinks 7.00323 0.0 18.7653    
cufflinks 5.75675 0.0 15.5196    
cufflinks 5.79041 0.0 15.6112    
cufflinks 6.69403 0.0 17.935    
cufflinks 9.46365 0.0 25.2479   High
cufflinks 5.69618 0.0 15.3788    
cufflinks 6.009        
cufflinks 5.835     High  
cufflinks 9.595     High  
cufflinks 3.944       Low
cufflinks 3.84       Low
cufflinks 11.048     High High
cufflinks 6.863        
cufflinks 2.554       Low
cufflinks 6.691        
cufflinks 9.185     High  
cufflinks 6.615        
cufflinks 13.078     High High
cufflinks 7.926     High  
cufflinks 7.03        
cufflinks 7.775     High  
cufflinks 6.74        
cufflinks 7.052     High  

0 Strain