Gene : Glyma.16G035100 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR10799:SF577 - PROTEIN TAF-3, ISOFORM A Genomic Order:  351
Name:  ? Glyma.16G035100 Secondary Identifier:  ? PAC:30562201
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.16G035100 0.5kb upstream 0.5kb upstream 11905 true Chr16: 3320804-3332708 Glycine max
Glyma.16G035100 0.5kb upstream 0.5kb upstream 500 false Chr16: 3332209-3332708 Glycine max
Glyma.16G035100 0.5kb downstream 0.5kb downstream 11905 true Chr16: 3320304-3332208 Glycine max
Glyma.16G035100 0.5kb downstream 0.5kb downstream 500 false Chr16: 3320304-3320803 Glycine max
Glyma.16G035100 1.0kb upstream 1.0kb upstream 12405 true Chr16: 3320804-3333208 Glycine max
Glyma.16G035100 1.0kb upstream 1.0kb upstream 1000 false Chr16: 3332209-3333208 Glycine max
Glyma.16G035100 1.0kb downstream 1.0kb downstream 12405 true Chr16: 3319804-3332208 Glycine max
Glyma.16G035100 1.0kb downstream 1.0kb downstream 1000 false Chr16: 3319804-3320803 Glycine max
Glyma.16G035100 2.0kb upstream 2.0kb upstream 13405 true Chr16: 3320804-3334208 Glycine max
Glyma.16G035100 2.0kb upstream 2.0kb upstream 2000 false Chr16: 3332209-3334208 Glycine max
Glyma.16G035100 2.0kb downstream 2.0kb downstream 13405 true Chr16: 3318804-3332208 Glycine max
Glyma.16G035100 2.0kb downstream 2.0kb downstream 2000 false Chr16: 3318804-3320803 Glycine max
Glyma.16G035100 5.0kb upstream 5.0kb upstream 16405 true Chr16: 3320804-3337208 Glycine max
Glyma.16G035100 5.0kb upstream 5.0kb upstream 5000 false Chr16: 3332209-3337208 Glycine max
Glyma.16G035100 5.0kb downstream 5.0kb downstream 16405 true Chr16: 3315804-3332208 Glycine max
Glyma.16G035100 5.0kb downstream 5.0kb downstream 5000 false Chr16: 3315804-3320803 Glycine max
Glyma.16G035100 10.0kb upstream 10.0kb upstream 21405 true Chr16: 3320804-3342208 Glycine max
Glyma.16G035100 10.0kb upstream 10.0kb upstream 10000 false Chr16: 3332209-3342208 Glycine max
Glyma.16G035100 10.0kb downstream 10.0kb downstream 21405 true Chr16: 3310804-3332208 Glycine max
Glyma.16G035100 10.0kb downstream 10.0kb downstream 10000 false Chr16: 3310804-3320803 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304569 5265 Fabidae View MSA
124061210 5270 Rosid View MSA
123746200 5271 Pentapetalae View MSA
122788143 5272 Eudicot View MSA
122044493 5273 Angiosperm View MSA
121349128 5274 Embryophyte View MSA
123428510 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.064 0.0 31.2821   High
cufflinks 8.00584 0.0 21.9299    
cufflinks 9.4754 0.0 26.4228    
cufflinks 8.54185 0.0 23.5502    
cufflinks 4.16368 0.0 11.1095   Low
cufflinks 3.44655 0.0 9.20392   Low
cufflinks 12.1455 0.0 34.6506   High
cufflinks 5.47581 0.0 14.6988    
cufflinks 5.92761 0.0 15.9509    
cufflinks 4.98        
cufflinks 3.614       Low
cufflinks 9.157     High  
cufflinks 4.346        
cufflinks 4.3        
cufflinks 5.141        
cufflinks 10.087     High  
cufflinks 5.165        
cufflinks 12.025     High High
cufflinks 11.213     High High
cufflinks 10.941     High High
cufflinks 3.508       Low
cufflinks 11.307     High High
cufflinks 10.577     High  
cufflinks 4.569        
cufflinks 10.423     High  
cufflinks 4.752        

0 Strain