Gene : Glyma.16G037100 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR31412:SF0 - ZINC METALLOPROTEASE EGY1, CHLOROPLASTIC-RELATED Genomic Order:  371
Name:  ? Glyma.16G037100 Secondary Identifier:  ? PAC:30559824
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Ontology Annotation Displayer

0 Pathways

Genomics

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Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.16G037100 0.5kb upstream 0.5kb upstream 7202 true Chr16: 3520888-3528089 Glycine max
Glyma.16G037100 0.5kb upstream 0.5kb upstream 500 false Chr16: 3520888-3521387 Glycine max
Glyma.16G037100 0.5kb downstream 0.5kb downstream 7202 true Chr16: 3521388-3528589 Glycine max
Glyma.16G037100 0.5kb downstream 0.5kb downstream 500 false Chr16: 3528090-3528589 Glycine max
Glyma.16G037100 1.0kb upstream 1.0kb upstream 7702 true Chr16: 3520388-3528089 Glycine max
Glyma.16G037100 1.0kb upstream 1.0kb upstream 1000 false Chr16: 3520388-3521387 Glycine max
Glyma.16G037100 1.0kb downstream 1.0kb downstream 7702 true Chr16: 3521388-3529089 Glycine max
Glyma.16G037100 1.0kb downstream 1.0kb downstream 1000 false Chr16: 3528090-3529089 Glycine max
Glyma.16G037100 2.0kb upstream 2.0kb upstream 8702 true Chr16: 3519388-3528089 Glycine max
Glyma.16G037100 2.0kb upstream 2.0kb upstream 2000 false Chr16: 3519388-3521387 Glycine max
Glyma.16G037100 2.0kb downstream 2.0kb downstream 8702 true Chr16: 3521388-3530089 Glycine max
Glyma.16G037100 2.0kb downstream 2.0kb downstream 2000 false Chr16: 3528090-3530089 Glycine max
Glyma.16G037100 5.0kb upstream 5.0kb upstream 11702 true Chr16: 3516388-3528089 Glycine max
Glyma.16G037100 5.0kb upstream 5.0kb upstream 5000 false Chr16: 3516388-3521387 Glycine max
Glyma.16G037100 5.0kb downstream 5.0kb downstream 11702 true Chr16: 3521388-3533089 Glycine max
Glyma.16G037100 5.0kb downstream 5.0kb downstream 5000 false Chr16: 3528090-3533089 Glycine max
Glyma.16G037100 10.0kb upstream 10.0kb upstream 16702 true Chr16: 3511388-3528089 Glycine max
Glyma.16G037100 10.0kb upstream 10.0kb upstream 10000 false Chr16: 3511388-3521387 Glycine max
Glyma.16G037100 10.0kb downstream 10.0kb downstream 16702 true Chr16: 3521388-3538089 Glycine max
Glyma.16G037100 10.0kb downstream 10.0kb downstream 10000 false Chr16: 3528090-3538089 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308116 5265 Fabidae View MSA
124065213 5270 Rosid View MSA
123737712 5271 Pentapetalae View MSA
122791466 5272 Eudicot View MSA
122047981 5273 Angiosperm View MSA
121344636 5274 Embryophyte View MSA
123425233 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 21.0003 0.0 56.2733   High
cufflinks 8.0766 0.0 22.0383    
cufflinks 4.93543 0.0 14.082    
cufflinks 5.58004 0.0 15.6975    
cufflinks 3.31199 0.0 9.92378    
cufflinks 1.48975 0.0 4.9932   Low
cufflinks 5.91607 0.0 16.5255    
cufflinks 4.96661 0.0 14.1347    
cufflinks 5.61767 0.0 15.7721    
cufflinks 1.128        
cufflinks 0.579        
cufflinks 1.673        
cufflinks 0.477        
cufflinks 0.353       Low
cufflinks 1.068        
cufflinks 4.14       High
cufflinks 0.376       Low
cufflinks 1.877        
cufflinks 1.684        
cufflinks 5.923       High
cufflinks 0.421       Low
cufflinks 5.158       High
cufflinks 5.734       High
cufflinks 0.556        
cufflinks 4.713       High
cufflinks 0.302       Low

0 Strain