Gene : Glyma.16G025700 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR24031:SF265 - DEAD-BOX ATP-DEPENDENT RNA HELICASE 25-RELATED Genomic Order:  257
Name:  ? Glyma.16G025700 Secondary Identifier:  ? PAC:30560138
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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.16G025700 0.5kb upstream 0.5kb upstream 6631 true Chr16: 2490522-2497152 Glycine max
Glyma.16G025700 0.5kb upstream 0.5kb upstream 500 false Chr16: 2490522-2491021 Glycine max
Glyma.16G025700 0.5kb downstream 0.5kb downstream 6631 true Chr16: 2491022-2497652 Glycine max
Glyma.16G025700 0.5kb downstream 0.5kb downstream 500 false Chr16: 2497153-2497652 Glycine max
Glyma.16G025700 1.0kb upstream 1.0kb upstream 7131 true Chr16: 2490022-2497152 Glycine max
Glyma.16G025700 1.0kb upstream 1.0kb upstream 1000 false Chr16: 2490022-2491021 Glycine max
Glyma.16G025700 1.0kb downstream 1.0kb downstream 7131 true Chr16: 2491022-2498152 Glycine max
Glyma.16G025700 1.0kb downstream 1.0kb downstream 1000 false Chr16: 2497153-2498152 Glycine max
Glyma.16G025700 2.0kb upstream 2.0kb upstream 8131 true Chr16: 2489022-2497152 Glycine max
Glyma.16G025700 2.0kb upstream 2.0kb upstream 2000 false Chr16: 2489022-2491021 Glycine max
Glyma.16G025700 2.0kb downstream 2.0kb downstream 8131 true Chr16: 2491022-2499152 Glycine max
Glyma.16G025700 2.0kb downstream 2.0kb downstream 2000 false Chr16: 2497153-2499152 Glycine max
Glyma.16G025700 5.0kb upstream 5.0kb upstream 11131 true Chr16: 2486022-2497152 Glycine max
Glyma.16G025700 5.0kb upstream 5.0kb upstream 5000 false Chr16: 2486022-2491021 Glycine max
Glyma.16G025700 5.0kb downstream 5.0kb downstream 11131 true Chr16: 2491022-2502152 Glycine max
Glyma.16G025700 5.0kb downstream 5.0kb downstream 5000 false Chr16: 2497153-2502152 Glycine max
Glyma.16G025700 10.0kb upstream 10.0kb upstream 16131 true Chr16: 2481022-2497152 Glycine max
Glyma.16G025700 10.0kb upstream 10.0kb upstream 10000 false Chr16: 2481022-2491021 Glycine max
Glyma.16G025700 10.0kb downstream 10.0kb downstream 16131 true Chr16: 2491022-2507152 Glycine max
Glyma.16G025700 10.0kb downstream 10.0kb downstream 10000 false Chr16: 2497153-2507152 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311922 5265 Fabidae View MSA
124063521 5270 Rosid View MSA
123738215 5271 Pentapetalae View MSA
122794289 5272 Eudicot View MSA
122047115 5273 Angiosperm View MSA
121350061 5274 Embryophyte View MSA
123424072 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 16.3286 0.0 44.2433   High
cufflinks 6.32275 0.0 17.0428    
cufflinks 2.77573 0.0 8.03888    
cufflinks 2.63355 0.0 7.66321    
cufflinks 5.44291 0.0 14.7398    
cufflinks 1.87125 0.0 5.68663   Low
cufflinks 4.09297 0.0 11.3285    
cufflinks 4.29881 0.0 11.8657    
cufflinks 2.92566 0.0 8.38782    
cufflinks 2.832        
cufflinks 0.223       Low
cufflinks 2.512        
cufflinks 4.148        
cufflinks 4.931        
cufflinks 0.78        
cufflinks 7.775     High High
cufflinks 0.695        
cufflinks 2.012        
cufflinks 6.18        
cufflinks 5.077        
cufflinks 0.367       Low
cufflinks 6.018        
cufflinks 7.298       High
cufflinks 0.211       Low
cufflinks 7.122     High  
cufflinks 0.724        

0 Strain