Gene : Glyma.16G026800 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR33978:SF2 - EXPRESSED PROTEIN Genomic Order:  268
Name:  ? Glyma.16G026800 Secondary Identifier:  ? PAC:30559563
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.16G026800 0.5kb upstream 0.5kb upstream 905 true Chr16: 2600220-2601124 Glycine max
Glyma.16G026800 0.5kb upstream 0.5kb upstream 500 false Chr16: 2600625-2601124 Glycine max
Glyma.16G026800 0.5kb downstream 0.5kb downstream 905 true Chr16: 2599720-2600624 Glycine max
Glyma.16G026800 0.5kb downstream 0.5kb downstream 500 false Chr16: 2599720-2600219 Glycine max
Glyma.16G026800 1.0kb upstream 1.0kb upstream 1405 true Chr16: 2600220-2601624 Glycine max
Glyma.16G026800 1.0kb upstream 1.0kb upstream 1000 false Chr16: 2600625-2601624 Glycine max
Glyma.16G026800 1.0kb downstream 1.0kb downstream 1405 true Chr16: 2599220-2600624 Glycine max
Glyma.16G026800 1.0kb downstream 1.0kb downstream 1000 false Chr16: 2599220-2600219 Glycine max
Glyma.16G026800 2.0kb upstream 2.0kb upstream 2405 true Chr16: 2600220-2602624 Glycine max
Glyma.16G026800 2.0kb upstream 2.0kb upstream 2000 false Chr16: 2600625-2602624 Glycine max
Glyma.16G026800 2.0kb downstream 2.0kb downstream 2405 true Chr16: 2598220-2600624 Glycine max
Glyma.16G026800 2.0kb downstream 2.0kb downstream 2000 false Chr16: 2598220-2600219 Glycine max
Glyma.16G026800 5.0kb upstream 5.0kb upstream 5405 true Chr16: 2600220-2605624 Glycine max
Glyma.16G026800 5.0kb upstream 5.0kb upstream 5000 false Chr16: 2600625-2605624 Glycine max
Glyma.16G026800 5.0kb downstream 5.0kb downstream 5405 true Chr16: 2595220-2600624 Glycine max
Glyma.16G026800 5.0kb downstream 5.0kb downstream 5000 false Chr16: 2595220-2600219 Glycine max
Glyma.16G026800 10.0kb upstream 10.0kb upstream 10405 true Chr16: 2600220-2610624 Glycine max
Glyma.16G026800 10.0kb upstream 10.0kb upstream 10000 false Chr16: 2600625-2610624 Glycine max
Glyma.16G026800 10.0kb downstream 10.0kb downstream 10405 true Chr16: 2590220-2600624 Glycine max
Glyma.16G026800 10.0kb downstream 10.0kb downstream 10000 false Chr16: 2590220-2600219 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029230 5273 Angiosperm View MSA
122313823 5265 Fabidae View MSA
124073990 5270 Rosid View MSA
123746126 5271 Pentapetalae View MSA
122796980 5272 Eudicot View MSA
121298592 5274 Embryophyte View MSA
123336555 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.108842 0.0 0.492238 Low Low
cufflinks 0.72307 0.0 2.88122    
cufflinks 0.261904 0.0 1.09636    
cufflinks 0.115998 0.0 0.520512 Low Low
cufflinks 2.52311 0.0 9.56345   High
cufflinks 2.01304 0.0 7.71154   High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.72018 0.0 2.86747    
cufflinks 1.05675 0.0 4.15317    
cufflinks 0.677        
cufflinks 0.357        
cufflinks 0.079     Low Low
cufflinks 5.434       High
cufflinks 11.083     High High
cufflinks 0.228        
cufflinks 0.367        
cufflinks 0.198        
cufflinks 0.028     Low Low
cufflinks 1.068        
cufflinks 0.129        
cufflinks 0.545        
cufflinks 0.038     Low Low
cufflinks 0.391        
cufflinks 1.043        
cufflinks 0.304        
cufflinks 1.315        

0 Strain