Gene : Glyma.16G027400 G. max Wm82.a2.v1
Defline:  (1 of 7) PTHR23213//PTHR23213:SF220 - FORMIN-RELATED Genomic Order:  274
Name:  ? Glyma.16G027400 Secondary Identifier:  ? PAC:30562258
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.16G027400 0.5kb upstream 0.5kb upstream 5499 true Chr16: 2664310-2669808 Glycine max
Glyma.16G027400 0.5kb upstream 0.5kb upstream 500 false Chr16: 2669309-2669808 Glycine max
Glyma.16G027400 0.5kb downstream 0.5kb downstream 5499 true Chr16: 2663810-2669308 Glycine max
Glyma.16G027400 0.5kb downstream 0.5kb downstream 500 false Chr16: 2663810-2664309 Glycine max
Glyma.16G027400 1.0kb upstream 1.0kb upstream 5999 true Chr16: 2664310-2670308 Glycine max
Glyma.16G027400 1.0kb upstream 1.0kb upstream 1000 false Chr16: 2669309-2670308 Glycine max
Glyma.16G027400 1.0kb downstream 1.0kb downstream 5999 true Chr16: 2663310-2669308 Glycine max
Glyma.16G027400 1.0kb downstream 1.0kb downstream 1000 false Chr16: 2663310-2664309 Glycine max
Glyma.16G027400 2.0kb upstream 2.0kb upstream 6999 true Chr16: 2664310-2671308 Glycine max
Glyma.16G027400 2.0kb upstream 2.0kb upstream 2000 false Chr16: 2669309-2671308 Glycine max
Glyma.16G027400 2.0kb downstream 2.0kb downstream 6999 true Chr16: 2662310-2669308 Glycine max
Glyma.16G027400 2.0kb downstream 2.0kb downstream 2000 false Chr16: 2662310-2664309 Glycine max
Glyma.16G027400 5.0kb upstream 5.0kb upstream 9999 true Chr16: 2664310-2674308 Glycine max
Glyma.16G027400 5.0kb upstream 5.0kb upstream 5000 false Chr16: 2669309-2674308 Glycine max
Glyma.16G027400 5.0kb downstream 5.0kb downstream 9999 true Chr16: 2659310-2669308 Glycine max
Glyma.16G027400 5.0kb downstream 5.0kb downstream 5000 false Chr16: 2659310-2664309 Glycine max
Glyma.16G027400 10.0kb upstream 10.0kb upstream 14999 true Chr16: 2664310-2679308 Glycine max
Glyma.16G027400 10.0kb upstream 10.0kb upstream 10000 false Chr16: 2669309-2679308 Glycine max
Glyma.16G027400 10.0kb downstream 10.0kb downstream 14999 true Chr16: 2654310-2669308 Glycine max
Glyma.16G027400 10.0kb downstream 10.0kb downstream 10000 false Chr16: 2654310-2664309 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311904 5265 Fabidae View MSA
124073350 5270 Rosid View MSA
123751322 5271 Pentapetalae View MSA
122795488 5272 Eudicot View MSA
122050252 5273 Angiosperm View MSA
121351212 5274 Embryophyte View MSA
123428124 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.46682 0.0 7.05935   Low
cufflinks 13.6932 0.0 37.034    
cufflinks 2.98862 0.0 8.42602   Low
cufflinks 20.7485 0.0 57.9837 High  
cufflinks 12.0444 0.0 32.464    
cufflinks 8.48102 0.0 22.6312    
cufflinks 13.0246 0.0 35.1792    
cufflinks 25.3489 0.0 72.6941 High High
cufflinks 8.81457 0.0 23.5282    
cufflinks 9.54     High High
cufflinks 1.026       Low
cufflinks 4.24        
cufflinks 5.43        
cufflinks 5.597        
cufflinks 1.889       Low
cufflinks 7.812     High  
cufflinks 1.602       Low
cufflinks 5.933        
cufflinks 12.353     High High
cufflinks 5.45        
cufflinks 2.101        
cufflinks 6.293        
cufflinks 7.43        
cufflinks 1.341       Low
cufflinks 5.48        
cufflinks 2.762        

0 Strain