Gene : Glyma.16G028800 G. max Wm82.a2.v1
Defline:  (1 of 6) PTHR23410 - RIBOSOMAL PROTEIN L5-RELATED Genomic Order:  288
Name:  ? Glyma.16G028800 Secondary Identifier:  ? PAC:30559885
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.16G028800 0.5kb upstream 0.5kb upstream 2957 true Chr16: 2762204-2765160 Glycine max
Glyma.16G028800 0.5kb upstream 0.5kb upstream 500 false Chr16: 2764661-2765160 Glycine max
Glyma.16G028800 0.5kb downstream 0.5kb downstream 2957 true Chr16: 2761704-2764660 Glycine max
Glyma.16G028800 0.5kb downstream 0.5kb downstream 500 false Chr16: 2761704-2762203 Glycine max
Glyma.16G028800 1.0kb upstream 1.0kb upstream 3457 true Chr16: 2762204-2765660 Glycine max
Glyma.16G028800 1.0kb upstream 1.0kb upstream 1000 false Chr16: 2764661-2765660 Glycine max
Glyma.16G028800 1.0kb downstream 1.0kb downstream 3457 true Chr16: 2761204-2764660 Glycine max
Glyma.16G028800 1.0kb downstream 1.0kb downstream 1000 false Chr16: 2761204-2762203 Glycine max
Glyma.16G028800 2.0kb upstream 2.0kb upstream 4457 true Chr16: 2762204-2766660 Glycine max
Glyma.16G028800 2.0kb upstream 2.0kb upstream 2000 false Chr16: 2764661-2766660 Glycine max
Glyma.16G028800 2.0kb downstream 2.0kb downstream 4457 true Chr16: 2760204-2764660 Glycine max
Glyma.16G028800 2.0kb downstream 2.0kb downstream 2000 false Chr16: 2760204-2762203 Glycine max
Glyma.16G028800 5.0kb upstream 5.0kb upstream 7457 true Chr16: 2762204-2769660 Glycine max
Glyma.16G028800 5.0kb upstream 5.0kb upstream 5000 false Chr16: 2764661-2769660 Glycine max
Glyma.16G028800 5.0kb downstream 5.0kb downstream 7457 true Chr16: 2757204-2764660 Glycine max
Glyma.16G028800 5.0kb downstream 5.0kb downstream 5000 false Chr16: 2757204-2762203 Glycine max
Glyma.16G028800 10.0kb upstream 10.0kb upstream 12457 true Chr16: 2762204-2774660 Glycine max
Glyma.16G028800 10.0kb upstream 10.0kb upstream 10000 false Chr16: 2764661-2774660 Glycine max
Glyma.16G028800 10.0kb downstream 10.0kb downstream 12457 true Chr16: 2752204-2764660 Glycine max
Glyma.16G028800 10.0kb downstream 10.0kb downstream 10000 false Chr16: 2752204-2762203 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312221 5265 Fabidae View MSA
124061233 5270 Rosid View MSA
123751479 5271 Pentapetalae View MSA
122787634 5272 Eudicot View MSA
122045073 5273 Angiosperm View MSA
121347703 5274 Embryophyte View MSA
123424766 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 53.894 0.0 198.205 High  
cufflinks 64.1484 0.0 294.831 High  
cufflinks 22.4117 0.0 92.1654 High Low
cufflinks 51.4178 0.0 190.378 High  
cufflinks 136.635 0.0 737.539 High High
cufflinks 85.968 0.0 430.356 High  
cufflinks 172.454 0.0 809.292 High High
cufflinks 60.3741 0.0 228.83 High  
cufflinks 88.651 0.0 372.456 High  
cufflinks 11.056     High  
cufflinks 2.882       Low
cufflinks 8.633     High  
cufflinks 39.862     High High
cufflinks 55.827     High High
cufflinks 3.05       Low
cufflinks 7.036        
cufflinks 6.73     High  
cufflinks 8.281     High  
cufflinks 13.713     High  
cufflinks 4.729        
cufflinks 4.534        
cufflinks 5.474        
cufflinks 9.129     High  
cufflinks 3.482       Low
cufflinks 6.016        
cufflinks 7.361     High  

0 Strain