Gene : Glyma.16G031300 G. max Wm82.a2.v1
Defline:  (1 of 105) PF03168 - Late embryogenesis abundant protein (LEA_2) Genomic Order:  313
Name:  ? Glyma.16G031300 Secondary Identifier:  ? PAC:30560961
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.16G031300 0.5kb upstream 0.5kb upstream 1803 true Chr16: 2949165-2950967 Glycine max
Glyma.16G031300 0.5kb upstream 0.5kb upstream 500 false Chr16: 2950468-2950967 Glycine max
Glyma.16G031300 0.5kb downstream 0.5kb downstream 1803 true Chr16: 2948665-2950467 Glycine max
Glyma.16G031300 0.5kb downstream 0.5kb downstream 500 false Chr16: 2948665-2949164 Glycine max
Glyma.16G031300 1.0kb upstream 1.0kb upstream 2303 true Chr16: 2949165-2951467 Glycine max
Glyma.16G031300 1.0kb upstream 1.0kb upstream 1000 false Chr16: 2950468-2951467 Glycine max
Glyma.16G031300 1.0kb downstream 1.0kb downstream 2303 true Chr16: 2948165-2950467 Glycine max
Glyma.16G031300 1.0kb downstream 1.0kb downstream 1000 false Chr16: 2948165-2949164 Glycine max
Glyma.16G031300 2.0kb upstream 2.0kb upstream 3303 true Chr16: 2949165-2952467 Glycine max
Glyma.16G031300 2.0kb upstream 2.0kb upstream 2000 false Chr16: 2950468-2952467 Glycine max
Glyma.16G031300 2.0kb downstream 2.0kb downstream 3303 true Chr16: 2947165-2950467 Glycine max
Glyma.16G031300 2.0kb downstream 2.0kb downstream 2000 false Chr16: 2947165-2949164 Glycine max
Glyma.16G031300 5.0kb upstream 5.0kb upstream 6303 true Chr16: 2949165-2955467 Glycine max
Glyma.16G031300 5.0kb upstream 5.0kb upstream 5000 false Chr16: 2950468-2955467 Glycine max
Glyma.16G031300 5.0kb downstream 5.0kb downstream 6303 true Chr16: 2944165-2950467 Glycine max
Glyma.16G031300 5.0kb downstream 5.0kb downstream 5000 false Chr16: 2944165-2949164 Glycine max
Glyma.16G031300 10.0kb upstream 10.0kb upstream 11303 true Chr16: 2949165-2960467 Glycine max
Glyma.16G031300 10.0kb upstream 10.0kb upstream 10000 false Chr16: 2950468-2960467 Glycine max
Glyma.16G031300 10.0kb downstream 10.0kb downstream 11303 true Chr16: 2939165-2950467 Glycine max
Glyma.16G031300 10.0kb downstream 10.0kb downstream 10000 false Chr16: 2939165-2949164 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311929 5265 Fabidae View MSA
124063327 5270 Rosid View MSA
123749565 5271 Pentapetalae View MSA
122795600 5272 Eudicot View MSA
122043658 5273 Angiosperm View MSA
121348077 5274 Embryophyte View MSA
123380721 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0552501 0.0 0.23932 Low  
cufflinks 2.53871 0.0 9.02156    
cufflinks 12.9021 0.0 37.7211    
cufflinks 15.546 0.0 44.3636    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0336359 0.0 0.152135 Low Low
cufflinks 0.87       High
cufflinks 0.374       High
cufflinks 0.033     Low  
cufflinks 0.191        
cufflinks 0.075        
cufflinks 0.014     Low Low
cufflinks 0.014     Low Low
cufflinks 0.544       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.009     Low Low
cufflinks 0.067     Low  
cufflinks 0.156        
cufflinks 0.086     Low  
cufflinks 0.171        
cufflinks 0.218        
cufflinks 0.026     Low  
cufflinks 0.112        

0 Strain