Gene : Glyma.16G032200 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR11751:SF284 - 1-AMINOCYCLOPROPANE-1-CARBOXYLATE SYNTHASE-LIKE PROTEIN 1 Genomic Order:  322
Name:  ? Glyma.16G032200 Secondary Identifier:  ? PAC:30560487
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax ETHYL-PWY Glycine max pathologic  
Gmax PWY-7270 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.16G032200 0.5kb upstream 0.5kb upstream 4602 true Chr16: 3050219-3054820 Glycine max
Glyma.16G032200 0.5kb upstream 0.5kb upstream 500 false Chr16: 3050219-3050718 Glycine max
Glyma.16G032200 0.5kb downstream 0.5kb downstream 4602 true Chr16: 3050719-3055320 Glycine max
Glyma.16G032200 0.5kb downstream 0.5kb downstream 500 false Chr16: 3054821-3055320 Glycine max
Glyma.16G032200 1.0kb upstream 1.0kb upstream 5102 true Chr16: 3049719-3054820 Glycine max
Glyma.16G032200 1.0kb upstream 1.0kb upstream 1000 false Chr16: 3049719-3050718 Glycine max
Glyma.16G032200 1.0kb downstream 1.0kb downstream 5102 true Chr16: 3050719-3055820 Glycine max
Glyma.16G032200 1.0kb downstream 1.0kb downstream 1000 false Chr16: 3054821-3055820 Glycine max
Glyma.16G032200 2.0kb upstream 2.0kb upstream 6102 true Chr16: 3048719-3054820 Glycine max
Glyma.16G032200 2.0kb upstream 2.0kb upstream 2000 false Chr16: 3048719-3050718 Glycine max
Glyma.16G032200 2.0kb downstream 2.0kb downstream 6102 true Chr16: 3050719-3056820 Glycine max
Glyma.16G032200 2.0kb downstream 2.0kb downstream 2000 false Chr16: 3054821-3056820 Glycine max
Glyma.16G032200 5.0kb upstream 5.0kb upstream 9102 true Chr16: 3045719-3054820 Glycine max
Glyma.16G032200 5.0kb upstream 5.0kb upstream 5000 false Chr16: 3045719-3050718 Glycine max
Glyma.16G032200 5.0kb downstream 5.0kb downstream 9102 true Chr16: 3050719-3059820 Glycine max
Glyma.16G032200 5.0kb downstream 5.0kb downstream 5000 false Chr16: 3054821-3059820 Glycine max
Glyma.16G032200 10.0kb upstream 10.0kb upstream 14102 true Chr16: 3040719-3054820 Glycine max
Glyma.16G032200 10.0kb upstream 10.0kb upstream 10000 false Chr16: 3040719-3050718 Glycine max
Glyma.16G032200 10.0kb downstream 10.0kb downstream 14102 true Chr16: 3050719-3064820 Glycine max
Glyma.16G032200 10.0kb downstream 10.0kb downstream 10000 false Chr16: 3054821-3064820 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122297875 5265 Fabidae View MSA
124064739 5270 Rosid View MSA
123742797 5271 Pentapetalae View MSA
122787155 5272 Eudicot View MSA
122050094 5273 Angiosperm View MSA
121311735 5274 Embryophyte View MSA
123428176 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0111535 0.0 0.0504418 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 10.5607 0.0 28.396   High
cufflinks 0.0357095 0.0 0.147059 Low  
cufflinks 0.0383749 0.0 0.15769 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.00984599 0.0 0.0450967 Low  
cufflinks 0.021676 0.0 0.0924305 Low  
cufflinks 0.0109889 0.0 0.0497026 Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 1.535        
cufflinks 4.771       High
cufflinks 0.075     Low  
cufflinks 0.084        
cufflinks 0.678        
cufflinks 0.004     Low Low
cufflinks 4.355       High
cufflinks 0.003     Low Low
cufflinks 0.03     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.797        
cufflinks 0.004     Low Low
cufflinks 0.1     Low  
cufflinks 0.738        
cufflinks 0.005     Low Low
cufflinks 1.461        

0 Strain