Gene : Glyma.16G079900 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR22812 - CHROMOBOX PROTEIN Genomic Order:  799
Name:  ? Glyma.16G079900 Secondary Identifier:  ? PAC:30560616
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Ontology Annotation Displayer

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Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.16G079900 0.5kb upstream 0.5kb upstream 9169 true Chr16: 8506615-8515783 Glycine max
Glyma.16G079900 0.5kb upstream 0.5kb upstream 500 false Chr16: 8506615-8507114 Glycine max
Glyma.16G079900 0.5kb downstream 0.5kb downstream 9169 true Chr16: 8507115-8516283 Glycine max
Glyma.16G079900 0.5kb downstream 0.5kb downstream 500 false Chr16: 8515784-8516283 Glycine max
Glyma.16G079900 1.0kb upstream 1.0kb upstream 9669 true Chr16: 8506115-8515783 Glycine max
Glyma.16G079900 1.0kb upstream 1.0kb upstream 1000 false Chr16: 8506115-8507114 Glycine max
Glyma.16G079900 1.0kb downstream 1.0kb downstream 9669 true Chr16: 8507115-8516783 Glycine max
Glyma.16G079900 1.0kb downstream 1.0kb downstream 1000 false Chr16: 8515784-8516783 Glycine max
Glyma.16G079900 2.0kb upstream 2.0kb upstream 10669 true Chr16: 8505115-8515783 Glycine max
Glyma.16G079900 2.0kb upstream 2.0kb upstream 2000 false Chr16: 8505115-8507114 Glycine max
Glyma.16G079900 2.0kb downstream 2.0kb downstream 10669 true Chr16: 8507115-8517783 Glycine max
Glyma.16G079900 2.0kb downstream 2.0kb downstream 2000 false Chr16: 8515784-8517783 Glycine max
Glyma.16G079900 5.0kb upstream 5.0kb upstream 13669 true Chr16: 8502115-8515783 Glycine max
Glyma.16G079900 5.0kb upstream 5.0kb upstream 5000 false Chr16: 8502115-8507114 Glycine max
Glyma.16G079900 5.0kb downstream 5.0kb downstream 13669 true Chr16: 8507115-8520783 Glycine max
Glyma.16G079900 5.0kb downstream 5.0kb downstream 5000 false Chr16: 8515784-8520783 Glycine max
Glyma.16G079900 10.0kb upstream 10.0kb upstream 18669 true Chr16: 8497115-8515783 Glycine max
Glyma.16G079900 10.0kb upstream 10.0kb upstream 10000 false Chr16: 8497115-8507114 Glycine max
Glyma.16G079900 10.0kb downstream 10.0kb downstream 18669 true Chr16: 8507115-8525783 Glycine max
Glyma.16G079900 10.0kb downstream 10.0kb downstream 10000 false Chr16: 8515784-8525783 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300488 5265 Fabidae View MSA
124068397 5270 Rosid View MSA
123743602 5271 Pentapetalae View MSA
122791541 5272 Eudicot View MSA
122044379 5273 Angiosperm View MSA
121347782 5274 Embryophyte View MSA
123380626 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.3066 0.0 14.7852    
cufflinks 7.19717 0.0 19.584   High
cufflinks 6.01224 0.0 16.5378    
cufflinks 4.75076 0.0 13.3629    
cufflinks 5.11657 0.0 14.3058    
cufflinks 3.83059 0.0 11.0547   Low
cufflinks 4.8125 0.0 13.5387    
cufflinks 5.85595 0.0 16.1642    
cufflinks 5.77117 0.0 15.9582    
cufflinks 1.142        
cufflinks 1.275        
cufflinks 2.196       High
cufflinks 1.6        
cufflinks 1.845        
cufflinks 1.08        
cufflinks 1.377        
cufflinks 1.043       Low
cufflinks 2.219       High
cufflinks 2.901       High
cufflinks 1.204        
cufflinks 1.22        
cufflinks 1.465        
cufflinks 2.354       High
cufflinks 1.323        
cufflinks 1.268        
cufflinks 0.922       Low

0 Strain