Gene : Glyma.16G081200 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR31956:SF1 - NON-SPECIFIC PHOSPHOLIPASE C3-RELATED Genomic Order:  812
Name:  ? Glyma.16G081200 Secondary Identifier:  ? PAC:30561991
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax LIPASYN-PWY Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.16G081200 0.5kb upstream 0.5kb upstream 5185 true Chr16: 8705786-8710970 Glycine max
Glyma.16G081200 0.5kb upstream 0.5kb upstream 500 false Chr16: 8705786-8706285 Glycine max
Glyma.16G081200 0.5kb downstream 0.5kb downstream 5185 true Chr16: 8706286-8711470 Glycine max
Glyma.16G081200 0.5kb downstream 0.5kb downstream 500 false Chr16: 8710971-8711470 Glycine max
Glyma.16G081200 1.0kb upstream 1.0kb upstream 5685 true Chr16: 8705286-8710970 Glycine max
Glyma.16G081200 1.0kb upstream 1.0kb upstream 1000 false Chr16: 8705286-8706285 Glycine max
Glyma.16G081200 1.0kb downstream 1.0kb downstream 5685 true Chr16: 8706286-8711970 Glycine max
Glyma.16G081200 1.0kb downstream 1.0kb downstream 1000 false Chr16: 8710971-8711970 Glycine max
Glyma.16G081200 2.0kb upstream 2.0kb upstream 6685 true Chr16: 8704286-8710970 Glycine max
Glyma.16G081200 2.0kb upstream 2.0kb upstream 2000 false Chr16: 8704286-8706285 Glycine max
Glyma.16G081200 2.0kb downstream 2.0kb downstream 6685 true Chr16: 8706286-8712970 Glycine max
Glyma.16G081200 2.0kb downstream 2.0kb downstream 2000 false Chr16: 8710971-8712970 Glycine max
Glyma.16G081200 5.0kb upstream 5.0kb upstream 9685 true Chr16: 8701286-8710970 Glycine max
Glyma.16G081200 5.0kb upstream 5.0kb upstream 5000 false Chr16: 8701286-8706285 Glycine max
Glyma.16G081200 5.0kb downstream 5.0kb downstream 9685 true Chr16: 8706286-8715970 Glycine max
Glyma.16G081200 5.0kb downstream 5.0kb downstream 5000 false Chr16: 8710971-8715970 Glycine max
Glyma.16G081200 10.0kb upstream 10.0kb upstream 14685 true Chr16: 8696286-8710970 Glycine max
Glyma.16G081200 10.0kb upstream 10.0kb upstream 10000 false Chr16: 8696286-8706285 Glycine max
Glyma.16G081200 10.0kb downstream 10.0kb downstream 14685 true Chr16: 8706286-8720970 Glycine max
Glyma.16G081200 10.0kb downstream 10.0kb downstream 10000 false Chr16: 8710971-8720970 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309057 5265 Fabidae View MSA
124067828 5270 Rosid View MSA
123747461 5271 Pentapetalae View MSA
122786129 5272 Eudicot View MSA
122043766 5273 Angiosperm View MSA
121350885 5274 Embryophyte View MSA
123381922 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.13189 0.0 7.8599    
cufflinks 0.24284 0.0 1.64096 Low Low
cufflinks 8.34856 0.0 37.9238    
cufflinks 1.2337 0.0 8.61132    
cufflinks 11.6736 0.0 48.7173    
cufflinks 10.387 0.0 44.6497    
cufflinks 0.414185 0.0 3.58764   Low
cufflinks 11.2351 0.0 46.8259    
cufflinks 13.5517 0.0 60.6895    
cufflinks 0.435        
cufflinks 1.131        
cufflinks 0.787        
cufflinks 2.393       High
cufflinks 1.603        
cufflinks 1.588        
cufflinks 0.024     Low Low
cufflinks 1.116        
cufflinks 0.174        
cufflinks 0.051     Low  
cufflinks 0.011     Low Low
cufflinks 2.295       High
cufflinks 0.03     Low Low
cufflinks 0.03     Low Low
cufflinks 1.4        
cufflinks 0.017     Low Low
cufflinks 3.251       High

0 Strain