Gene : Glyma.16G081400 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR10836//PTHR10836:SF46 - GLYCERALDEHYDE 3-PHOSPHATE DEHYDROGENASE Genomic Order:  814
Name:  ? Glyma.16G081400 Secondary Identifier:  ? PAC:30559781
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

6 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax ANAEROFRUCAT-PWY Glycine max pathologic  
Gmax ANAGLYCOLYSIS-PWY Glycine max pathologic  
Gmax GLUCONEO-PWY Glycine max pathologic  
Gmax PWY-1042 Glycine max pathologic  
Gmax PWY-5464 Glycine max pathologic  
Gmax SUCSYN-PWY Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.16G081400 0.5kb upstream 0.5kb upstream 6595 true Chr16: 8745206-8751800 Glycine max
Glyma.16G081400 0.5kb upstream 0.5kb upstream 500 false Chr16: 8745206-8745705 Glycine max
Glyma.16G081400 0.5kb downstream 0.5kb downstream 6595 true Chr16: 8745706-8752300 Glycine max
Glyma.16G081400 0.5kb downstream 0.5kb downstream 500 false Chr16: 8751801-8752300 Glycine max
Glyma.16G081400 1.0kb upstream 1.0kb upstream 7095 true Chr16: 8744706-8751800 Glycine max
Glyma.16G081400 1.0kb upstream 1.0kb upstream 1000 false Chr16: 8744706-8745705 Glycine max
Glyma.16G081400 1.0kb downstream 1.0kb downstream 7095 true Chr16: 8745706-8752800 Glycine max
Glyma.16G081400 1.0kb downstream 1.0kb downstream 1000 false Chr16: 8751801-8752800 Glycine max
Glyma.16G081400 2.0kb upstream 2.0kb upstream 8095 true Chr16: 8743706-8751800 Glycine max
Glyma.16G081400 2.0kb upstream 2.0kb upstream 2000 false Chr16: 8743706-8745705 Glycine max
Glyma.16G081400 2.0kb downstream 2.0kb downstream 8095 true Chr16: 8745706-8753800 Glycine max
Glyma.16G081400 2.0kb downstream 2.0kb downstream 2000 false Chr16: 8751801-8753800 Glycine max
Glyma.16G081400 5.0kb upstream 5.0kb upstream 11095 true Chr16: 8740706-8751800 Glycine max
Glyma.16G081400 5.0kb upstream 5.0kb upstream 5000 false Chr16: 8740706-8745705 Glycine max
Glyma.16G081400 5.0kb downstream 5.0kb downstream 11095 true Chr16: 8745706-8756800 Glycine max
Glyma.16G081400 5.0kb downstream 5.0kb downstream 5000 false Chr16: 8751801-8756800 Glycine max
Glyma.16G081400 10.0kb upstream 10.0kb upstream 16095 true Chr16: 8735706-8751800 Glycine max
Glyma.16G081400 10.0kb upstream 10.0kb upstream 10000 false Chr16: 8735706-8745705 Glycine max
Glyma.16G081400 10.0kb downstream 10.0kb downstream 16095 true Chr16: 8745706-8761800 Glycine max
Glyma.16G081400 10.0kb downstream 10.0kb downstream 10000 false Chr16: 8751801-8761800 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306260 5265 Fabidae View MSA
124063810 5270 Rosid View MSA
123738168 5271 Pentapetalae View MSA
122792653 5272 Eudicot View MSA
122042179 5273 Angiosperm View MSA
121345581 5274 Embryophyte View MSA
123425180 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.62099 0.0 20.9112   Low
cufflinks 14.6892 0.0 39.2008    
cufflinks 10.7688 0.0 28.9195    
cufflinks 14.7347 0.0 39.3192    
cufflinks 37.0244 0.0 102.51 High High
cufflinks 24.3121 0.0 65.4703 High  
cufflinks 16.5402 0.0 44.1288    
cufflinks 12.6646 0.0 33.8714    
cufflinks 58.6666 0.0 172.043 High High
cufflinks 3.949        
cufflinks 2.703        
cufflinks 6.105        
cufflinks 17.245     High High
cufflinks 18.519     High High
cufflinks 12.166     High High
cufflinks 1.727       Low
cufflinks 8.125     High  
cufflinks 10.454     High  
cufflinks 6.396        
cufflinks 1.028       Low
cufflinks 4.646        
cufflinks 1.665       Low
cufflinks 3.724        
cufflinks 5.404        
cufflinks 1.526       Low
cufflinks 8.285     High  

0 Strain