Gene : Glyma.16G081900 G. max Wm82.a2.v1
Defline:  (1 of 96) PF13962 - Domain of unknown function (PGG) Genomic Order:  819
Name:  ? Glyma.16G081900 Secondary Identifier:  ? PAC:30559365
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.16G081900 0.5kb upstream 0.5kb upstream 10131 true Chr16: 8844681-8854811 Glycine max
Glyma.16G081900 0.5kb upstream 0.5kb upstream 500 false Chr16: 8854312-8854811 Glycine max
Glyma.16G081900 0.5kb downstream 0.5kb downstream 10131 true Chr16: 8844181-8854311 Glycine max
Glyma.16G081900 0.5kb downstream 0.5kb downstream 500 false Chr16: 8844181-8844680 Glycine max
Glyma.16G081900 1.0kb upstream 1.0kb upstream 10631 true Chr16: 8844681-8855311 Glycine max
Glyma.16G081900 1.0kb upstream 1.0kb upstream 1000 false Chr16: 8854312-8855311 Glycine max
Glyma.16G081900 1.0kb downstream 1.0kb downstream 10631 true Chr16: 8843681-8854311 Glycine max
Glyma.16G081900 1.0kb downstream 1.0kb downstream 1000 false Chr16: 8843681-8844680 Glycine max
Glyma.16G081900 2.0kb upstream 2.0kb upstream 11631 true Chr16: 8844681-8856311 Glycine max
Glyma.16G081900 2.0kb upstream 2.0kb upstream 2000 false Chr16: 8854312-8856311 Glycine max
Glyma.16G081900 2.0kb downstream 2.0kb downstream 11631 true Chr16: 8842681-8854311 Glycine max
Glyma.16G081900 2.0kb downstream 2.0kb downstream 2000 false Chr16: 8842681-8844680 Glycine max
Glyma.16G081900 5.0kb upstream 5.0kb upstream 14631 true Chr16: 8844681-8859311 Glycine max
Glyma.16G081900 5.0kb upstream 5.0kb upstream 5000 false Chr16: 8854312-8859311 Glycine max
Glyma.16G081900 5.0kb downstream 5.0kb downstream 14631 true Chr16: 8839681-8854311 Glycine max
Glyma.16G081900 5.0kb downstream 5.0kb downstream 5000 false Chr16: 8839681-8844680 Glycine max
Glyma.16G081900 10.0kb upstream 10.0kb upstream 19631 true Chr16: 8844681-8864311 Glycine max
Glyma.16G081900 10.0kb upstream 10.0kb upstream 10000 false Chr16: 8854312-8864311 Glycine max
Glyma.16G081900 10.0kb downstream 10.0kb downstream 19631 true Chr16: 8834681-8854311 Glycine max
Glyma.16G081900 10.0kb downstream 10.0kb downstream 10000 false Chr16: 8834681-8844680 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122315215 5265 Fabidae View MSA
124074259 5270 Rosid View MSA
123753624 5271 Pentapetalae View MSA
122797775 5272 Eudicot View MSA
122051097 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121351705 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.85948 0.0 22.1998    
cufflinks 0.425911 0.0 2.11002    
cufflinks 7.73667 0.0 32.0266   High
cufflinks 3.75797 0.0 16.239    
cufflinks 0.627775 0.0 3.0267    
cufflinks 0.160042 0.0 0.632636 Low Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 3.65219 0.0 16.2948    
cufflinks 1.07662 0.0 4.79157    
cufflinks 0.665       High
cufflinks 0.01     Low Low
cufflinks 0.364       High
cufflinks 0.058     Low  
cufflinks 0.009     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.087     Low  
cufflinks 0.165        
cufflinks 0.149        
cufflinks 0.009     Low Low
cufflinks 0.068     Low  
cufflinks 0.05     Low  
cufflinks 0.099        
cufflinks 0.123        
cufflinks 0.005     Low Low
cufflinks 0.096     Low  
cufflinks 0.103        

0 Strain