Gene : Glyma.16G082000 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR24177:SF32 - ANKYRIN REPEAT FAMILY PROTEIN Genomic Order:  820
Name:  ? Glyma.16G082000 Secondary Identifier:  ? PAC:30562292
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.16G082000 0.5kb upstream 0.5kb upstream 16500 true Chr16: 8863644-8880143 Glycine max
Glyma.16G082000 0.5kb upstream 0.5kb upstream 500 false Chr16: 8879644-8880143 Glycine max
Glyma.16G082000 0.5kb downstream 0.5kb downstream 16500 true Chr16: 8863144-8879643 Glycine max
Glyma.16G082000 0.5kb downstream 0.5kb downstream 500 false Chr16: 8863144-8863643 Glycine max
Glyma.16G082000 1.0kb upstream 1.0kb upstream 17000 true Chr16: 8863644-8880643 Glycine max
Glyma.16G082000 1.0kb upstream 1.0kb upstream 1000 false Chr16: 8879644-8880643 Glycine max
Glyma.16G082000 1.0kb downstream 1.0kb downstream 17000 true Chr16: 8862644-8879643 Glycine max
Glyma.16G082000 1.0kb downstream 1.0kb downstream 1000 false Chr16: 8862644-8863643 Glycine max
Glyma.16G082000 2.0kb upstream 2.0kb upstream 18000 true Chr16: 8863644-8881643 Glycine max
Glyma.16G082000 2.0kb upstream 2.0kb upstream 2000 false Chr16: 8879644-8881643 Glycine max
Glyma.16G082000 2.0kb downstream 2.0kb downstream 18000 true Chr16: 8861644-8879643 Glycine max
Glyma.16G082000 2.0kb downstream 2.0kb downstream 2000 false Chr16: 8861644-8863643 Glycine max
Glyma.16G082000 5.0kb upstream 5.0kb upstream 21000 true Chr16: 8863644-8884643 Glycine max
Glyma.16G082000 5.0kb upstream 5.0kb upstream 5000 false Chr16: 8879644-8884643 Glycine max
Glyma.16G082000 5.0kb downstream 5.0kb downstream 21000 true Chr16: 8858644-8879643 Glycine max
Glyma.16G082000 5.0kb downstream 5.0kb downstream 5000 false Chr16: 8858644-8863643 Glycine max
Glyma.16G082000 10.0kb upstream 10.0kb upstream 26000 true Chr16: 8863644-8889643 Glycine max
Glyma.16G082000 10.0kb upstream 10.0kb upstream 10000 false Chr16: 8879644-8889643 Glycine max
Glyma.16G082000 10.0kb downstream 10.0kb downstream 26000 true Chr16: 8853644-8879643 Glycine max
Glyma.16G082000 10.0kb downstream 10.0kb downstream 10000 false Chr16: 8853644-8863643 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312793 5265 Fabidae View MSA
124074786 5270 Rosid View MSA
123753624 5271 Pentapetalae View MSA
122797775 5272 Eudicot View MSA
122051097 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121351705 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.6843 0.0 17.6807    
cufflinks 0.150117 0.0 0.600545 Low Low
cufflinks 5.25551 0.0 22.8441   High
cufflinks 2.55449 0.0 13.4962    
cufflinks 0.20917 0.0 0.828043 Low Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 3.09171 0.0 15.2837    
cufflinks 0.484952 0.0 3.30305    
cufflinks 0.433       High
cufflinks 0.01     Low Low
cufflinks 0.302       High
cufflinks 0.036     Low  
cufflinks 0.007     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.082     Low  
cufflinks 0.116        
cufflinks 0.137        
cufflinks 0.012     Low Low
cufflinks 0.054     Low  
cufflinks 0.045     Low  
cufflinks 0.071     Low  
cufflinks 0.091     Low  
cufflinks 0.008     Low Low
cufflinks 0.068     Low  
cufflinks 0.108        

0 Strain