Gene : Glyma.16G082400 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR11141//PTHR11141:SF2 - PROTEIN TRANSPORT PROTEIN SEC23 Genomic Order:  824
Name:  ? Glyma.16G082400 Secondary Identifier:  ? PAC:30560686
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.16G082400 0.5kb upstream 0.5kb upstream 25525 true Chr16: 9198304-9223828 Glycine max
Glyma.16G082400 0.5kb upstream 0.5kb upstream 500 false Chr16: 9198304-9198803 Glycine max
Glyma.16G082400 0.5kb downstream 0.5kb downstream 25525 true Chr16: 9198804-9224328 Glycine max
Glyma.16G082400 0.5kb downstream 0.5kb downstream 500 false Chr16: 9223829-9224328 Glycine max
Glyma.16G082400 1.0kb upstream 1.0kb upstream 26025 true Chr16: 9197804-9223828 Glycine max
Glyma.16G082400 1.0kb upstream 1.0kb upstream 1000 false Chr16: 9197804-9198803 Glycine max
Glyma.16G082400 1.0kb downstream 1.0kb downstream 26025 true Chr16: 9198804-9224828 Glycine max
Glyma.16G082400 1.0kb downstream 1.0kb downstream 1000 false Chr16: 9223829-9224828 Glycine max
Glyma.16G082400 2.0kb upstream 2.0kb upstream 27025 true Chr16: 9196804-9223828 Glycine max
Glyma.16G082400 2.0kb upstream 2.0kb upstream 2000 false Chr16: 9196804-9198803 Glycine max
Glyma.16G082400 2.0kb downstream 2.0kb downstream 27025 true Chr16: 9198804-9225828 Glycine max
Glyma.16G082400 2.0kb downstream 2.0kb downstream 2000 false Chr16: 9223829-9225828 Glycine max
Glyma.16G082400 5.0kb upstream 5.0kb upstream 30025 true Chr16: 9193804-9223828 Glycine max
Glyma.16G082400 5.0kb upstream 5.0kb upstream 5000 false Chr16: 9193804-9198803 Glycine max
Glyma.16G082400 5.0kb downstream 5.0kb downstream 30025 true Chr16: 9198804-9228828 Glycine max
Glyma.16G082400 5.0kb downstream 5.0kb downstream 5000 false Chr16: 9223829-9228828 Glycine max
Glyma.16G082400 10.0kb upstream 10.0kb upstream 35025 true Chr16: 9188804-9223828 Glycine max
Glyma.16G082400 10.0kb upstream 10.0kb upstream 10000 false Chr16: 9188804-9198803 Glycine max
Glyma.16G082400 10.0kb downstream 10.0kb downstream 35025 true Chr16: 9198804-9233828 Glycine max
Glyma.16G082400 10.0kb downstream 10.0kb downstream 10000 false Chr16: 9223829-9233828 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301749 5265 Fabidae View MSA
124066116 5270 Rosid View MSA
123738448 5271 Pentapetalae View MSA
122787646 5272 Eudicot View MSA
122045932 5273 Angiosperm View MSA
121348482 5274 Embryophyte View MSA
123424383 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.9331 0.0 41.1938    
cufflinks 12.0399 0.0 41.1977    
cufflinks 10.9794 0.0 37.6171    
cufflinks 17.6634 0.0 62.473   High
cufflinks 15.5945 0.0 54.6331    
cufflinks 8.2902 0.0 28.7153   Low
cufflinks 7.88401 0.0 23.9212   Low
cufflinks 16.7092 0.0 57.6464   High
cufflinks 12.6418 0.0 43.328    
cufflinks 0.79       High
cufflinks 0.249       Low
cufflinks 0.457        
cufflinks 0.746        
cufflinks 0.771       High
cufflinks 0.281       Low
cufflinks 0.639        
cufflinks 0.417        
cufflinks 0.643        
cufflinks 0.746        
cufflinks 0.629        
cufflinks 0.359        
cufflinks 0.654        
cufflinks 0.586        
cufflinks 0.304       Low
cufflinks 0.596        
cufflinks 0.381        

0 Strain