Gene : Glyma.16G082900 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR19302:SF13 - GAMMA-TUBULIN COMPLEX COMPONENT 2 Genomic Order:  829
Name:  ? Glyma.16G082900 Secondary Identifier:  ? PAC:30559137
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.16G082900 0.5kb upstream 0.5kb upstream 36098 true Chr16: 9352045-9388142 Glycine max
Glyma.16G082900 0.5kb upstream 0.5kb upstream 500 false Chr16: 9352045-9352544 Glycine max
Glyma.16G082900 0.5kb downstream 0.5kb downstream 36098 true Chr16: 9352545-9388642 Glycine max
Glyma.16G082900 0.5kb downstream 0.5kb downstream 500 false Chr16: 9388143-9388642 Glycine max
Glyma.16G082900 1.0kb upstream 1.0kb upstream 36598 true Chr16: 9351545-9388142 Glycine max
Glyma.16G082900 1.0kb upstream 1.0kb upstream 1000 false Chr16: 9351545-9352544 Glycine max
Glyma.16G082900 1.0kb downstream 1.0kb downstream 36598 true Chr16: 9352545-9389142 Glycine max
Glyma.16G082900 1.0kb downstream 1.0kb downstream 1000 false Chr16: 9388143-9389142 Glycine max
Glyma.16G082900 2.0kb upstream 2.0kb upstream 37598 true Chr16: 9350545-9388142 Glycine max
Glyma.16G082900 2.0kb upstream 2.0kb upstream 2000 false Chr16: 9350545-9352544 Glycine max
Glyma.16G082900 2.0kb downstream 2.0kb downstream 37598 true Chr16: 9352545-9390142 Glycine max
Glyma.16G082900 2.0kb downstream 2.0kb downstream 2000 false Chr16: 9388143-9390142 Glycine max
Glyma.16G082900 5.0kb upstream 5.0kb upstream 40598 true Chr16: 9347545-9388142 Glycine max
Glyma.16G082900 5.0kb upstream 5.0kb upstream 5000 false Chr16: 9347545-9352544 Glycine max
Glyma.16G082900 5.0kb downstream 5.0kb downstream 40598 true Chr16: 9352545-9393142 Glycine max
Glyma.16G082900 5.0kb downstream 5.0kb downstream 5000 false Chr16: 9388143-9393142 Glycine max
Glyma.16G082900 10.0kb upstream 10.0kb upstream 45598 true Chr16: 9342545-9388142 Glycine max
Glyma.16G082900 10.0kb upstream 10.0kb upstream 10000 false Chr16: 9342545-9352544 Glycine max
Glyma.16G082900 10.0kb downstream 10.0kb downstream 45598 true Chr16: 9352545-9398142 Glycine max
Glyma.16G082900 10.0kb downstream 10.0kb downstream 10000 false Chr16: 9388143-9398142 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302022 5265 Fabidae View MSA
124065778 5270 Rosid View MSA
123736920 5271 Pentapetalae View MSA
122786083 5272 Eudicot View MSA
122049825 5273 Angiosperm View MSA
121347196 5274 Embryophyte View MSA
123428052 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.60541 0.0 7.35659   Low
cufflinks 5.15553 0.0 16.7473   High
cufflinks 1.85912 0.0 8.04051   Low
cufflinks 3.14965 0.0 15.3524    
cufflinks 3.85059 0.0 15.8256    
cufflinks 3.32052 0.0 14.1398    
cufflinks 2.83633 0.0 12.8735    
cufflinks 4.15244 0.0 16.7114    
cufflinks 3.35893 0.0 12.1967    
cufflinks 0.095     Low  
cufflinks 0.023     Low Low
cufflinks 0.058     Low  
cufflinks 0.115        
cufflinks 0.133       High
cufflinks 0.039     Low Low
cufflinks 0.097     Low  
cufflinks 0.054     Low  
cufflinks 0.067     Low  
cufflinks 0.152       High
cufflinks 0.079     Low  
cufflinks 0.04     Low Low
cufflinks 0.09     Low  
cufflinks 0.125       High
cufflinks 0.039     Low Low
cufflinks 0.08     Low  
cufflinks 0.045     Low  

0 Strain