Gene : Glyma.16G084100 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR12702//PTHR12702:SF4 - SEC15 Genomic Order:  841
Name:  ? Glyma.16G084100 Secondary Identifier:  ? PAC:30560273
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.16G084100 0.5kb upstream 0.5kb upstream 3159 true Chr16: 9702222-9705380 Glycine max
Glyma.16G084100 0.5kb upstream 0.5kb upstream 500 false Chr16: 9704881-9705380 Glycine max
Glyma.16G084100 0.5kb downstream 0.5kb downstream 3159 true Chr16: 9701722-9704880 Glycine max
Glyma.16G084100 0.5kb downstream 0.5kb downstream 500 false Chr16: 9701722-9702221 Glycine max
Glyma.16G084100 1.0kb upstream 1.0kb upstream 3659 true Chr16: 9702222-9705880 Glycine max
Glyma.16G084100 1.0kb upstream 1.0kb upstream 1000 false Chr16: 9704881-9705880 Glycine max
Glyma.16G084100 1.0kb downstream 1.0kb downstream 3659 true Chr16: 9701222-9704880 Glycine max
Glyma.16G084100 1.0kb downstream 1.0kb downstream 1000 false Chr16: 9701222-9702221 Glycine max
Glyma.16G084100 2.0kb upstream 2.0kb upstream 4659 true Chr16: 9702222-9706880 Glycine max
Glyma.16G084100 2.0kb upstream 2.0kb upstream 2000 false Chr16: 9704881-9706880 Glycine max
Glyma.16G084100 2.0kb downstream 2.0kb downstream 4659 true Chr16: 9700222-9704880 Glycine max
Glyma.16G084100 2.0kb downstream 2.0kb downstream 2000 false Chr16: 9700222-9702221 Glycine max
Glyma.16G084100 5.0kb upstream 5.0kb upstream 7659 true Chr16: 9702222-9709880 Glycine max
Glyma.16G084100 5.0kb upstream 5.0kb upstream 5000 false Chr16: 9704881-9709880 Glycine max
Glyma.16G084100 5.0kb downstream 5.0kb downstream 7659 true Chr16: 9697222-9704880 Glycine max
Glyma.16G084100 5.0kb downstream 5.0kb downstream 5000 false Chr16: 9697222-9702221 Glycine max
Glyma.16G084100 10.0kb upstream 10.0kb upstream 12659 true Chr16: 9702222-9714880 Glycine max
Glyma.16G084100 10.0kb upstream 10.0kb upstream 10000 false Chr16: 9704881-9714880 Glycine max
Glyma.16G084100 10.0kb downstream 10.0kb downstream 12659 true Chr16: 9692222-9704880 Glycine max
Glyma.16G084100 10.0kb downstream 10.0kb downstream 10000 false Chr16: 9692222-9702221 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311364 5265 Fabidae View MSA
124063470 5270 Rosid View MSA
123747184 5271 Pentapetalae View MSA
122789290 5272 Eudicot View MSA
122044095 5273 Angiosperm View MSA
121349214 5274 Embryophyte View MSA
123424246 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0344475 0.0 0.139649 Low High
cufflinks 0.00876997 0.0 0.0393529 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.00806644 0.0 0.0365084 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.123       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.008     Low  
cufflinks 0.014     Low  
cufflinks 0.535       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.013     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.006     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.008     Low  
cufflinks 0.005     Low  
cufflinks 0.0     Not Expressed Not Expressed

0 Strain