Gene : Glyma.16G073200 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR22981//PTHR22981:SF77 - 3-HYDROXYISOBUTYRATE DEHYDROGENASE-RELATED Genomic Order:  732
Name:  ? Glyma.16G073200 Secondary Identifier:  ? PAC:30560324
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.16G073200 0.5kb upstream 0.5kb upstream 4675 true Chr16: 7386512-7391186 Glycine max
Glyma.16G073200 0.5kb upstream 0.5kb upstream 500 false Chr16: 7386512-7387011 Glycine max
Glyma.16G073200 0.5kb downstream 0.5kb downstream 4675 true Chr16: 7387012-7391686 Glycine max
Glyma.16G073200 0.5kb downstream 0.5kb downstream 500 false Chr16: 7391187-7391686 Glycine max
Glyma.16G073200 1.0kb upstream 1.0kb upstream 5175 true Chr16: 7386012-7391186 Glycine max
Glyma.16G073200 1.0kb upstream 1.0kb upstream 1000 false Chr16: 7386012-7387011 Glycine max
Glyma.16G073200 1.0kb downstream 1.0kb downstream 5175 true Chr16: 7387012-7392186 Glycine max
Glyma.16G073200 1.0kb downstream 1.0kb downstream 1000 false Chr16: 7391187-7392186 Glycine max
Glyma.16G073200 2.0kb upstream 2.0kb upstream 6175 true Chr16: 7385012-7391186 Glycine max
Glyma.16G073200 2.0kb upstream 2.0kb upstream 2000 false Chr16: 7385012-7387011 Glycine max
Glyma.16G073200 2.0kb downstream 2.0kb downstream 6175 true Chr16: 7387012-7393186 Glycine max
Glyma.16G073200 2.0kb downstream 2.0kb downstream 2000 false Chr16: 7391187-7393186 Glycine max
Glyma.16G073200 5.0kb upstream 5.0kb upstream 9175 true Chr16: 7382012-7391186 Glycine max
Glyma.16G073200 5.0kb upstream 5.0kb upstream 5000 false Chr16: 7382012-7387011 Glycine max
Glyma.16G073200 5.0kb downstream 5.0kb downstream 9175 true Chr16: 7387012-7396186 Glycine max
Glyma.16G073200 5.0kb downstream 5.0kb downstream 5000 false Chr16: 7391187-7396186 Glycine max
Glyma.16G073200 10.0kb upstream 10.0kb upstream 14175 true Chr16: 7377012-7391186 Glycine max
Glyma.16G073200 10.0kb upstream 10.0kb upstream 10000 false Chr16: 7377012-7387011 Glycine max
Glyma.16G073200 10.0kb downstream 10.0kb downstream 14175 true Chr16: 7387012-7401186 Glycine max
Glyma.16G073200 10.0kb downstream 10.0kb downstream 10000 false Chr16: 7391187-7401186 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303894 5265 Fabidae View MSA
124072008 5270 Rosid View MSA
123749922 5271 Pentapetalae View MSA
122795074 5272 Eudicot View MSA
122049561 5273 Angiosperm View MSA
121311475 5274 Embryophyte View MSA
123348768 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.59738 0.0 17.6014   High
cufflinks 4.19198 0.0 11.3112    
cufflinks 3.77789 0.0 10.2253    
cufflinks 4.33191 0.0 11.66    
cufflinks 3.01401 0.0 8.31671   Low
cufflinks 3.81076 0.0 10.3347    
cufflinks 4.94739 0.0 13.2724    
cufflinks 3.42702 0.0 9.34684    
cufflinks 3.81188 0.0 10.3379    
cufflinks 5.53        
cufflinks 5.543     High  
cufflinks 7.604     High  
cufflinks 5.967        
cufflinks 5.574        
cufflinks 4.407       Low
cufflinks 8.015     High  
cufflinks 4.338       Low
cufflinks 7.425     High  
cufflinks 8.013     High  
cufflinks 7.716     High  
cufflinks 6.381     High  
cufflinks 8.471     High High
cufflinks 8.117     High High
cufflinks 6.37     High  
cufflinks 7.449     High  
cufflinks 5.717        

0 Strain