Gene : Glyma.16G076500 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR22780:SF13 - AP-4 COMPLEX SUBUNIT EPSILON-1 Genomic Order:  765
Name:  ? Glyma.16G076500 Secondary Identifier:  ? PAC:30560183
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.16G076500 0.5kb upstream 0.5kb upstream 10939 true Chr16: 7750175-7761113 Glycine max
Glyma.16G076500 0.5kb upstream 0.5kb upstream 500 false Chr16: 7750175-7750674 Glycine max
Glyma.16G076500 0.5kb downstream 0.5kb downstream 10939 true Chr16: 7750675-7761613 Glycine max
Glyma.16G076500 0.5kb downstream 0.5kb downstream 500 false Chr16: 7761114-7761613 Glycine max
Glyma.16G076500 1.0kb upstream 1.0kb upstream 11439 true Chr16: 7749675-7761113 Glycine max
Glyma.16G076500 1.0kb upstream 1.0kb upstream 1000 false Chr16: 7749675-7750674 Glycine max
Glyma.16G076500 1.0kb downstream 1.0kb downstream 11439 true Chr16: 7750675-7762113 Glycine max
Glyma.16G076500 1.0kb downstream 1.0kb downstream 1000 false Chr16: 7761114-7762113 Glycine max
Glyma.16G076500 2.0kb upstream 2.0kb upstream 12439 true Chr16: 7748675-7761113 Glycine max
Glyma.16G076500 2.0kb upstream 2.0kb upstream 2000 false Chr16: 7748675-7750674 Glycine max
Glyma.16G076500 2.0kb downstream 2.0kb downstream 12439 true Chr16: 7750675-7763113 Glycine max
Glyma.16G076500 2.0kb downstream 2.0kb downstream 2000 false Chr16: 7761114-7763113 Glycine max
Glyma.16G076500 5.0kb upstream 5.0kb upstream 15439 true Chr16: 7745675-7761113 Glycine max
Glyma.16G076500 5.0kb upstream 5.0kb upstream 5000 false Chr16: 7745675-7750674 Glycine max
Glyma.16G076500 5.0kb downstream 5.0kb downstream 15439 true Chr16: 7750675-7766113 Glycine max
Glyma.16G076500 5.0kb downstream 5.0kb downstream 5000 false Chr16: 7761114-7766113 Glycine max
Glyma.16G076500 10.0kb upstream 10.0kb upstream 20439 true Chr16: 7740675-7761113 Glycine max
Glyma.16G076500 10.0kb upstream 10.0kb upstream 10000 false Chr16: 7740675-7750674 Glycine max
Glyma.16G076500 10.0kb downstream 10.0kb downstream 20439 true Chr16: 7750675-7771113 Glycine max
Glyma.16G076500 10.0kb downstream 10.0kb downstream 10000 false Chr16: 7761114-7771113 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304348 5265 Fabidae View MSA
124067026 5270 Rosid View MSA
123751016 5271 Pentapetalae View MSA
122788074 5272 Eudicot View MSA
122045484 5273 Angiosperm View MSA
121344174 5274 Embryophyte View MSA
123427678 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.59361 0.0 20.2707    
cufflinks 5.71886 0.0 15.3786   Low
cufflinks 6.06037 0.0 16.2597    
cufflinks 9.83223 0.0 26.2623   High
cufflinks 7.96161 0.0 21.2428    
cufflinks 6.48519 0.0 17.3612    
cufflinks 8.32231 0.0 22.2034    
cufflinks 8.23542 0.0 21.9715    
cufflinks 5.89221 0.0 15.818   Low
cufflinks 3.7       High
cufflinks 2.82        
cufflinks 2.572        
cufflinks 2.912        
cufflinks 3.018        
cufflinks 2.632        
cufflinks 2.539        
cufflinks 4.036       High
cufflinks 2.755        
cufflinks 2.954        
cufflinks 2.045       Low
cufflinks 3.504        
cufflinks 2.345        
cufflinks 2.397        
cufflinks 3.156        
cufflinks 2.067       Low
cufflinks 4.171       High

0 Strain