Gene : Glyma.16G077300 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR13872:SF1 - DOLICHYL-DIPHOSPHOOLIGOSACCHARIDE--PROTEIN GLYCOSYLTRANSFERASE SUBUNIT STT3B Genomic Order:  773
Name:  ? Glyma.16G077300 Secondary Identifier:  ? PAC:30561657
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.16G077300 0.5kb upstream 0.5kb upstream 9115 true Chr16: 7923562-7932676 Glycine max
Glyma.16G077300 0.5kb upstream 0.5kb upstream 500 false Chr16: 7932177-7932676 Glycine max
Glyma.16G077300 0.5kb downstream 0.5kb downstream 9115 true Chr16: 7923062-7932176 Glycine max
Glyma.16G077300 0.5kb downstream 0.5kb downstream 500 false Chr16: 7923062-7923561 Glycine max
Glyma.16G077300 1.0kb upstream 1.0kb upstream 9615 true Chr16: 7923562-7933176 Glycine max
Glyma.16G077300 1.0kb upstream 1.0kb upstream 1000 false Chr16: 7932177-7933176 Glycine max
Glyma.16G077300 1.0kb downstream 1.0kb downstream 9615 true Chr16: 7922562-7932176 Glycine max
Glyma.16G077300 1.0kb downstream 1.0kb downstream 1000 false Chr16: 7922562-7923561 Glycine max
Glyma.16G077300 2.0kb upstream 2.0kb upstream 10615 true Chr16: 7923562-7934176 Glycine max
Glyma.16G077300 2.0kb upstream 2.0kb upstream 2000 false Chr16: 7932177-7934176 Glycine max
Glyma.16G077300 2.0kb downstream 2.0kb downstream 10615 true Chr16: 7921562-7932176 Glycine max
Glyma.16G077300 2.0kb downstream 2.0kb downstream 2000 false Chr16: 7921562-7923561 Glycine max
Glyma.16G077300 5.0kb upstream 5.0kb upstream 13615 true Chr16: 7923562-7937176 Glycine max
Glyma.16G077300 5.0kb upstream 5.0kb upstream 5000 false Chr16: 7932177-7937176 Glycine max
Glyma.16G077300 5.0kb downstream 5.0kb downstream 13615 true Chr16: 7918562-7932176 Glycine max
Glyma.16G077300 5.0kb downstream 5.0kb downstream 5000 false Chr16: 7918562-7923561 Glycine max
Glyma.16G077300 10.0kb upstream 10.0kb upstream 18615 true Chr16: 7923562-7942176 Glycine max
Glyma.16G077300 10.0kb upstream 10.0kb upstream 10000 false Chr16: 7932177-7942176 Glycine max
Glyma.16G077300 10.0kb downstream 10.0kb downstream 18615 true Chr16: 7913562-7932176 Glycine max
Glyma.16G077300 10.0kb downstream 10.0kb downstream 10000 false Chr16: 7913562-7923561 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041451 5273 Angiosperm View MSA
122299315 5265 Fabidae View MSA
124062338 5270 Rosid View MSA
123739535 5271 Pentapetalae View MSA
122792930 5272 Eudicot View MSA
121345608 5274 Embryophyte View MSA
123425256 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 34.2688 0.0 96.401 High  
cufflinks 26.5705 0.0 72.9678 High  
cufflinks 10.8124 0.0 28.874   Low
cufflinks 42.6211 0.0 123.287 High  
cufflinks 40.8171 0.0 117.194 High  
cufflinks 33.4062 0.0 93.8565 High  
cufflinks 41.0125 0.0 117.752 High  
cufflinks 26.3029 0.0 72.19 High  
cufflinks 29.3831 0.0 81.4361 High  
cufflinks 11.776     High  
cufflinks 1.862       Low
cufflinks 6.542        
cufflinks 16.284     High High
cufflinks 18.328     High High
cufflinks 2.006       Low
cufflinks 8.454     High  
cufflinks 6.259     High  
cufflinks 9.163     High  
cufflinks 11.871     High  
cufflinks 5.522        
cufflinks 4.262        
cufflinks 7.317     High  
cufflinks 8.984     High  
cufflinks 4.302        
cufflinks 5.789        
cufflinks 5.907        

0 Strain