Gene : Glyma.16G077400 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR33265:SF8 - F5F19.20 PROTEIN Genomic Order:  774
Name:  ? Glyma.16G077400 Secondary Identifier:  ? PAC:30561105
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.16G077400 0.5kb upstream 0.5kb upstream 2218 true Chr16: 7948938-7951155 Glycine max
Glyma.16G077400 0.5kb upstream 0.5kb upstream 500 false Chr16: 7948938-7949437 Glycine max
Glyma.16G077400 0.5kb downstream 0.5kb downstream 2218 true Chr16: 7949438-7951655 Glycine max
Glyma.16G077400 0.5kb downstream 0.5kb downstream 500 false Chr16: 7951156-7951655 Glycine max
Glyma.16G077400 1.0kb upstream 1.0kb upstream 2718 true Chr16: 7948438-7951155 Glycine max
Glyma.16G077400 1.0kb upstream 1.0kb upstream 1000 false Chr16: 7948438-7949437 Glycine max
Glyma.16G077400 1.0kb downstream 1.0kb downstream 2718 true Chr16: 7949438-7952155 Glycine max
Glyma.16G077400 1.0kb downstream 1.0kb downstream 1000 false Chr16: 7951156-7952155 Glycine max
Glyma.16G077400 2.0kb upstream 2.0kb upstream 3718 true Chr16: 7947438-7951155 Glycine max
Glyma.16G077400 2.0kb upstream 2.0kb upstream 2000 false Chr16: 7947438-7949437 Glycine max
Glyma.16G077400 2.0kb downstream 2.0kb downstream 3718 true Chr16: 7949438-7953155 Glycine max
Glyma.16G077400 2.0kb downstream 2.0kb downstream 2000 false Chr16: 7951156-7953155 Glycine max
Glyma.16G077400 5.0kb upstream 5.0kb upstream 6718 true Chr16: 7944438-7951155 Glycine max
Glyma.16G077400 5.0kb upstream 5.0kb upstream 5000 false Chr16: 7944438-7949437 Glycine max
Glyma.16G077400 5.0kb downstream 5.0kb downstream 6718 true Chr16: 7949438-7956155 Glycine max
Glyma.16G077400 5.0kb downstream 5.0kb downstream 5000 false Chr16: 7951156-7956155 Glycine max
Glyma.16G077400 10.0kb upstream 10.0kb upstream 11718 true Chr16: 7939438-7951155 Glycine max
Glyma.16G077400 10.0kb upstream 10.0kb upstream 10000 false Chr16: 7939438-7949437 Glycine max
Glyma.16G077400 10.0kb downstream 10.0kb downstream 11718 true Chr16: 7949438-7961155 Glycine max
Glyma.16G077400 10.0kb downstream 10.0kb downstream 10000 false Chr16: 7951156-7961155 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313783 5265 Fabidae View MSA
124070746 5270 Rosid View MSA
123749628 5271 Pentapetalae View MSA
122795982 5272 Eudicot View MSA
122049050 5273 Angiosperm View MSA
121311224 5274 Embryophyte View MSA
123348548 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.94117 0.0 19.9081    
cufflinks 1.0973 0.0 3.9244    
cufflinks 10.9507 0.0 30.0641   High
cufflinks 11.0475 0.0 30.2366   High
cufflinks 2.87423 0.0 9.2704    
cufflinks 0.494722 0.0 1.85101   Low
cufflinks 0.177104 0.0 0.692702 Low Low
cufflinks 3.0434 0.0 9.75198    
cufflinks 1.4976 0.0 5.22027    
cufflinks 1.13        
cufflinks 4.637        
cufflinks 11.45     High High
cufflinks 4.526        
cufflinks 0.618       Low
cufflinks 0.827       Low
cufflinks 1.227        
cufflinks 13.536     High High
cufflinks 8.339     High High
cufflinks 2.322        
cufflinks 1.983        
cufflinks 1.922        
cufflinks 1.052        
cufflinks 0.647       Low
cufflinks 4.378        
cufflinks 0.741       Low
cufflinks 3.82        

0 Strain