Gene : Glyma.16G068500 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR32175:SF2 - SURFEIT LOCUS PROTEIN 2 Genomic Order:  685
Name:  ? Glyma.16G068500 Secondary Identifier:  ? PAC:30558986
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.16G068500 0.5kb upstream 0.5kb upstream 3206 true Chr16: 6803222-6806427 Glycine max
Glyma.16G068500 0.5kb upstream 0.5kb upstream 500 false Chr16: 6803222-6803721 Glycine max
Glyma.16G068500 0.5kb downstream 0.5kb downstream 3206 true Chr16: 6803722-6806927 Glycine max
Glyma.16G068500 0.5kb downstream 0.5kb downstream 500 false Chr16: 6806428-6806927 Glycine max
Glyma.16G068500 1.0kb upstream 1.0kb upstream 3706 true Chr16: 6802722-6806427 Glycine max
Glyma.16G068500 1.0kb upstream 1.0kb upstream 1000 false Chr16: 6802722-6803721 Glycine max
Glyma.16G068500 1.0kb downstream 1.0kb downstream 3706 true Chr16: 6803722-6807427 Glycine max
Glyma.16G068500 1.0kb downstream 1.0kb downstream 1000 false Chr16: 6806428-6807427 Glycine max
Glyma.16G068500 2.0kb upstream 2.0kb upstream 4706 true Chr16: 6801722-6806427 Glycine max
Glyma.16G068500 2.0kb upstream 2.0kb upstream 2000 false Chr16: 6801722-6803721 Glycine max
Glyma.16G068500 2.0kb downstream 2.0kb downstream 4706 true Chr16: 6803722-6808427 Glycine max
Glyma.16G068500 2.0kb downstream 2.0kb downstream 2000 false Chr16: 6806428-6808427 Glycine max
Glyma.16G068500 5.0kb upstream 5.0kb upstream 7706 true Chr16: 6798722-6806427 Glycine max
Glyma.16G068500 5.0kb upstream 5.0kb upstream 5000 false Chr16: 6798722-6803721 Glycine max
Glyma.16G068500 5.0kb downstream 5.0kb downstream 7706 true Chr16: 6803722-6811427 Glycine max
Glyma.16G068500 5.0kb downstream 5.0kb downstream 5000 false Chr16: 6806428-6811427 Glycine max
Glyma.16G068500 10.0kb upstream 10.0kb upstream 12706 true Chr16: 6793722-6806427 Glycine max
Glyma.16G068500 10.0kb upstream 10.0kb upstream 10000 false Chr16: 6793722-6803721 Glycine max
Glyma.16G068500 10.0kb downstream 10.0kb downstream 12706 true Chr16: 6803722-6816427 Glycine max
Glyma.16G068500 10.0kb downstream 10.0kb downstream 10000 false Chr16: 6806428-6816427 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308653 5265 Fabidae View MSA
124062498 5270 Rosid View MSA
123741636 5271 Pentapetalae View MSA
122789257 5272 Eudicot View MSA
122045153 5273 Angiosperm View MSA
121344193 5274 Embryophyte View MSA
123425861 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.03795 0.0 22.6825   High
cufflinks 4.79382 0.0 14.4418    
cufflinks 5.74648 0.0 16.7939    
cufflinks 4.16611 0.0 12.7607    
cufflinks 4.85764 0.0 14.6394    
cufflinks 6.68291 0.0 19.3036   High
cufflinks 3.99191 0.0 12.3825   Low
cufflinks 4.96293 0.0 14.8638    
cufflinks 4.20456 0.0 12.9353    
cufflinks 2.6        
cufflinks 2.019       Low
cufflinks 4.102       High
cufflinks 3.296        
cufflinks 3.344        
cufflinks 1.432       Low
cufflinks 3.653        
cufflinks 2.118       Low
cufflinks 3.541        
cufflinks 3.036        
cufflinks 3.976        
cufflinks 2.639        
cufflinks 4.046        
cufflinks 4.087       High
cufflinks 3.077        
cufflinks 3.802        
cufflinks 2.59        

0 Strain