Gene : Glyma.16G071000 G. max Wm82.a2.v1
Defline:  (1 of 86) PF00005//PF00664 - ABC transporter (ABC_tran) // ABC transporter transmembrane region (ABC_membrane) Genomic Order:  710
Name:  ? Glyma.16G071000 Secondary Identifier:  ? PAC:30561419
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.16G071000 0.5kb upstream 0.5kb upstream 26039 true Chr16: 7097619-7123657 Glycine max
Glyma.16G071000 0.5kb upstream 0.5kb upstream 500 false Chr16: 7123158-7123657 Glycine max
Glyma.16G071000 0.5kb downstream 0.5kb downstream 26039 true Chr16: 7097119-7123157 Glycine max
Glyma.16G071000 0.5kb downstream 0.5kb downstream 500 false Chr16: 7097119-7097618 Glycine max
Glyma.16G071000 1.0kb upstream 1.0kb upstream 26539 true Chr16: 7097619-7124157 Glycine max
Glyma.16G071000 1.0kb upstream 1.0kb upstream 1000 false Chr16: 7123158-7124157 Glycine max
Glyma.16G071000 1.0kb downstream 1.0kb downstream 26539 true Chr16: 7096619-7123157 Glycine max
Glyma.16G071000 1.0kb downstream 1.0kb downstream 1000 false Chr16: 7096619-7097618 Glycine max
Glyma.16G071000 2.0kb upstream 2.0kb upstream 27539 true Chr16: 7097619-7125157 Glycine max
Glyma.16G071000 2.0kb upstream 2.0kb upstream 2000 false Chr16: 7123158-7125157 Glycine max
Glyma.16G071000 2.0kb downstream 2.0kb downstream 27539 true Chr16: 7095619-7123157 Glycine max
Glyma.16G071000 2.0kb downstream 2.0kb downstream 2000 false Chr16: 7095619-7097618 Glycine max
Glyma.16G071000 5.0kb upstream 5.0kb upstream 30539 true Chr16: 7097619-7128157 Glycine max
Glyma.16G071000 5.0kb upstream 5.0kb upstream 5000 false Chr16: 7123158-7128157 Glycine max
Glyma.16G071000 5.0kb downstream 5.0kb downstream 30539 true Chr16: 7092619-7123157 Glycine max
Glyma.16G071000 5.0kb downstream 5.0kb downstream 5000 false Chr16: 7092619-7097618 Glycine max
Glyma.16G071000 10.0kb upstream 10.0kb upstream 35539 true Chr16: 7097619-7133157 Glycine max
Glyma.16G071000 10.0kb upstream 10.0kb upstream 10000 false Chr16: 7123158-7133157 Glycine max
Glyma.16G071000 10.0kb downstream 10.0kb downstream 35539 true Chr16: 7087619-7123157 Glycine max
Glyma.16G071000 10.0kb downstream 10.0kb downstream 10000 false Chr16: 7087619-7097618 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307932 5265 Fabidae View MSA
124037812 5270 Rosid View MSA
123743062 5271 Pentapetalae View MSA
122793644 5272 Eudicot View MSA
122046260 5273 Angiosperm View MSA
123429075 5275 Viridiplantae View MSA
121346944 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.04089 0.0 13.0323    
cufflinks 4.04773 0.0 15.7258    
cufflinks 2.52294 0.0 17.6716   Low
cufflinks 3.81099 0.0 15.0022    
cufflinks 3.1263 0.0 15.0004    
cufflinks 2.29775 0.0 10.9372   Low
cufflinks 4.99384 0.0 25.6195   High
cufflinks 3.12568 0.0 19.7761    
cufflinks 2.87496 0.0 12.424    
cufflinks 0.064     Low  
cufflinks 0.024     Low Low
cufflinks 0.07     Low  
cufflinks 0.066     Low  
cufflinks 0.077        
cufflinks 0.032     Low  
cufflinks 0.077     Low  
cufflinks 0.031     Low  
cufflinks 0.097     Low High
cufflinks 0.097     Low High
cufflinks 0.078     Low  
cufflinks 0.02     Low Low
cufflinks 0.081     Low  
cufflinks 0.084     Low  
cufflinks 0.02     Low Low
cufflinks 0.074     Low  
cufflinks 0.03     Low  

0 Strain