Gene : Glyma.16G072400 G. max Wm82.a2.v1
Defline:  (1 of 1) PTHR10168//PTHR10168:SF104 - GLUTAREDOXIN Genomic Order:  724
Name:  ? Glyma.16G072400 Secondary Identifier:  ? PAC:30561434
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax THIOREDOX-PWY Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.16G072400 0.5kb upstream 0.5kb upstream 2992 true Chr16: 7291929-7294920 Glycine max
Glyma.16G072400 0.5kb upstream 0.5kb upstream 500 false Chr16: 7291929-7292428 Glycine max
Glyma.16G072400 0.5kb downstream 0.5kb downstream 2992 true Chr16: 7292429-7295420 Glycine max
Glyma.16G072400 0.5kb downstream 0.5kb downstream 500 false Chr16: 7294921-7295420 Glycine max
Glyma.16G072400 1.0kb upstream 1.0kb upstream 3492 true Chr16: 7291429-7294920 Glycine max
Glyma.16G072400 1.0kb upstream 1.0kb upstream 1000 false Chr16: 7291429-7292428 Glycine max
Glyma.16G072400 1.0kb downstream 1.0kb downstream 3492 true Chr16: 7292429-7295920 Glycine max
Glyma.16G072400 1.0kb downstream 1.0kb downstream 1000 false Chr16: 7294921-7295920 Glycine max
Glyma.16G072400 2.0kb upstream 2.0kb upstream 4492 true Chr16: 7290429-7294920 Glycine max
Glyma.16G072400 2.0kb upstream 2.0kb upstream 2000 false Chr16: 7290429-7292428 Glycine max
Glyma.16G072400 2.0kb downstream 2.0kb downstream 4492 true Chr16: 7292429-7296920 Glycine max
Glyma.16G072400 2.0kb downstream 2.0kb downstream 2000 false Chr16: 7294921-7296920 Glycine max
Glyma.16G072400 5.0kb upstream 5.0kb upstream 7492 true Chr16: 7287429-7294920 Glycine max
Glyma.16G072400 5.0kb upstream 5.0kb upstream 5000 false Chr16: 7287429-7292428 Glycine max
Glyma.16G072400 5.0kb downstream 5.0kb downstream 7492 true Chr16: 7292429-7299920 Glycine max
Glyma.16G072400 5.0kb downstream 5.0kb downstream 5000 false Chr16: 7294921-7299920 Glycine max
Glyma.16G072400 10.0kb upstream 10.0kb upstream 12492 true Chr16: 7282429-7294920 Glycine max
Glyma.16G072400 10.0kb upstream 10.0kb upstream 10000 false Chr16: 7282429-7292428 Glycine max
Glyma.16G072400 10.0kb downstream 10.0kb downstream 12492 true Chr16: 7292429-7304920 Glycine max
Glyma.16G072400 10.0kb downstream 10.0kb downstream 10000 false Chr16: 7294921-7304920 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307622 5265 Fabidae View MSA
124065401 5270 Rosid View MSA
123746542 5271 Pentapetalae View MSA
122795168 5272 Eudicot View MSA
122042909 5273 Angiosperm View MSA
121349337 5274 Embryophyte View MSA
123428660 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 219.807 0.0 664.224 High  
cufflinks 188.205 0.0 690.903 High  
cufflinks 270.422 0.0 886.028 High  
cufflinks 143.695 0.0 492.322 High Low
cufflinks 212.207 0.0 638.545 High  
cufflinks 335.808 0.0 1192.99 High High
cufflinks 258.879 0.0 833.899 High  
cufflinks 269.049 0.0 881.268 High  
cufflinks 209.537 0.0 629.681 High  
cufflinks 52.741     High High
cufflinks 40.113     High  
cufflinks 51.894     High High
cufflinks 38.901     High  
cufflinks 37.131     High  
cufflinks 29.514     High Low
cufflinks 42.338     High  
cufflinks 34.994     High  
cufflinks 65.09     High High
cufflinks 35.525     High  
cufflinks 38.643     High  
cufflinks 42.716     High  
cufflinks 41.406     High  
cufflinks 33.224     High Low
cufflinks 43.194     High  
cufflinks 43.156     High  
cufflinks 50.093     High  

0 Strain