Gene : Glyma.16G058300 G. max Wm82.a2.v1
Defline:  (1 of 1) PTHR12772 - DNA REPLICATION COMPLEX GINS PROTEIN PSF2 Genomic Order:  583
Name:  ? Glyma.16G058300 Secondary Identifier:  ? PAC:30560657
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.16G058300 0.5kb upstream 0.5kb upstream 6575 true Chr16: 5711099-5717673 Glycine max
Glyma.16G058300 0.5kb upstream 0.5kb upstream 500 false Chr16: 5711099-5711598 Glycine max
Glyma.16G058300 0.5kb downstream 0.5kb downstream 6575 true Chr16: 5711599-5718173 Glycine max
Glyma.16G058300 0.5kb downstream 0.5kb downstream 500 false Chr16: 5717674-5718173 Glycine max
Glyma.16G058300 1.0kb upstream 1.0kb upstream 7075 true Chr16: 5710599-5717673 Glycine max
Glyma.16G058300 1.0kb upstream 1.0kb upstream 1000 false Chr16: 5710599-5711598 Glycine max
Glyma.16G058300 1.0kb downstream 1.0kb downstream 7075 true Chr16: 5711599-5718673 Glycine max
Glyma.16G058300 1.0kb downstream 1.0kb downstream 1000 false Chr16: 5717674-5718673 Glycine max
Glyma.16G058300 2.0kb upstream 2.0kb upstream 8075 true Chr16: 5709599-5717673 Glycine max
Glyma.16G058300 2.0kb upstream 2.0kb upstream 2000 false Chr16: 5709599-5711598 Glycine max
Glyma.16G058300 2.0kb downstream 2.0kb downstream 8075 true Chr16: 5711599-5719673 Glycine max
Glyma.16G058300 2.0kb downstream 2.0kb downstream 2000 false Chr16: 5717674-5719673 Glycine max
Glyma.16G058300 5.0kb upstream 5.0kb upstream 11075 true Chr16: 5706599-5717673 Glycine max
Glyma.16G058300 5.0kb upstream 5.0kb upstream 5000 false Chr16: 5706599-5711598 Glycine max
Glyma.16G058300 5.0kb downstream 5.0kb downstream 11075 true Chr16: 5711599-5722673 Glycine max
Glyma.16G058300 5.0kb downstream 5.0kb downstream 5000 false Chr16: 5717674-5722673 Glycine max
Glyma.16G058300 10.0kb upstream 10.0kb upstream 16075 true Chr16: 5701599-5717673 Glycine max
Glyma.16G058300 10.0kb upstream 10.0kb upstream 10000 false Chr16: 5701599-5711598 Glycine max
Glyma.16G058300 10.0kb downstream 10.0kb downstream 16075 true Chr16: 5711599-5727673 Glycine max
Glyma.16G058300 10.0kb downstream 10.0kb downstream 10000 false Chr16: 5717674-5727673 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122785658 5272 Eudicot View MSA
122301003 5265 Fabidae View MSA
124064851 5270 Rosid View MSA
123738779 5271 Pentapetalae View MSA
122047700 5273 Angiosperm View MSA
121347474 5274 Embryophyte View MSA
123427862 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 18.7306 0.0 87.2997    
cufflinks 15.1454 0.0 60.6509    
cufflinks 23.0893 0.0 104.033 High High
cufflinks 20.8285 0.0 91.7326 High  
cufflinks 17.0158 0.0 77.2594    
cufflinks 9.84309 0.0 38.3001   Low
cufflinks 22.2173 0.0 83.1235 High  
cufflinks 16.672 0.0 66.857    
cufflinks 14.8724 0.0 62.9697    
cufflinks 0.594       Low
cufflinks 0.906        
cufflinks 1.052       High
cufflinks 0.87        
cufflinks 0.937        
cufflinks 1.011        
cufflinks 0.879        
cufflinks 0.618       Low
cufflinks 0.944        
cufflinks 1.093       High
cufflinks 0.84        
cufflinks 0.909        
cufflinks 0.827        
cufflinks 0.837        
cufflinks 0.953        
cufflinks 0.866        
cufflinks 0.86        

0 Strain