Gene : Glyma.16G058800 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR11922//PTHR11922:SF37 - GMP SYNTHASE-RELATED Genomic Order:  588
Name:  ? Glyma.16G058800 Secondary Identifier:  ? PAC:30562142
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax TRPSYN-PWY Glycine max pathologic  

Genomics

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Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.16G058800 0.5kb upstream 0.5kb upstream 5261 true Chr16: 5763408-5768668 Glycine max
Glyma.16G058800 0.5kb upstream 0.5kb upstream 500 false Chr16: 5763408-5763907 Glycine max
Glyma.16G058800 0.5kb downstream 0.5kb downstream 5261 true Chr16: 5763908-5769168 Glycine max
Glyma.16G058800 0.5kb downstream 0.5kb downstream 500 false Chr16: 5768669-5769168 Glycine max
Glyma.16G058800 1.0kb upstream 1.0kb upstream 5761 true Chr16: 5762908-5768668 Glycine max
Glyma.16G058800 1.0kb upstream 1.0kb upstream 1000 false Chr16: 5762908-5763907 Glycine max
Glyma.16G058800 1.0kb downstream 1.0kb downstream 5761 true Chr16: 5763908-5769668 Glycine max
Glyma.16G058800 1.0kb downstream 1.0kb downstream 1000 false Chr16: 5768669-5769668 Glycine max
Glyma.16G058800 2.0kb upstream 2.0kb upstream 6761 true Chr16: 5761908-5768668 Glycine max
Glyma.16G058800 2.0kb upstream 2.0kb upstream 2000 false Chr16: 5761908-5763907 Glycine max
Glyma.16G058800 2.0kb downstream 2.0kb downstream 6761 true Chr16: 5763908-5770668 Glycine max
Glyma.16G058800 2.0kb downstream 2.0kb downstream 2000 false Chr16: 5768669-5770668 Glycine max
Glyma.16G058800 5.0kb upstream 5.0kb upstream 9761 true Chr16: 5758908-5768668 Glycine max
Glyma.16G058800 5.0kb upstream 5.0kb upstream 5000 false Chr16: 5758908-5763907 Glycine max
Glyma.16G058800 5.0kb downstream 5.0kb downstream 9761 true Chr16: 5763908-5773668 Glycine max
Glyma.16G058800 5.0kb downstream 5.0kb downstream 5000 false Chr16: 5768669-5773668 Glycine max
Glyma.16G058800 10.0kb upstream 10.0kb upstream 14761 true Chr16: 5753908-5768668 Glycine max
Glyma.16G058800 10.0kb upstream 10.0kb upstream 10000 false Chr16: 5753908-5763907 Glycine max
Glyma.16G058800 10.0kb downstream 10.0kb downstream 14761 true Chr16: 5763908-5778668 Glycine max
Glyma.16G058800 10.0kb downstream 10.0kb downstream 10000 false Chr16: 5768669-5778668 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301638 5265 Fabidae View MSA
124061259 5270 Rosid View MSA
123743994 5271 Pentapetalae View MSA
122794235 5272 Eudicot View MSA
122041811 5273 Angiosperm View MSA
121344905 5274 Embryophyte View MSA
123424838 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 21.9707 0.0 58.6262   High
cufflinks 14.7668 0.0 39.8026    
cufflinks 20.722 0.0 55.3038 High High
cufflinks 16.9504 0.0 45.4342    
cufflinks 10.5954 0.0 29.1847   Low
cufflinks 14.2064 0.0 38.3682    
cufflinks 16.5781 0.0 44.4848    
cufflinks 19.7096 0.0 52.637    
cufflinks 12.3718 0.0 33.6445   Low
cufflinks 7.536        
cufflinks 2.95        
cufflinks 8.134     High High
cufflinks 3.086        
cufflinks 2.535       Low
cufflinks 3.356        
cufflinks 3.374        
cufflinks 15.219     High High
cufflinks 9.828     High High
cufflinks 7.088        
cufflinks 2.69       Low
cufflinks 4.098        
cufflinks 3.671        
cufflinks 6.099        
cufflinks 4.12        
cufflinks 2.749        
cufflinks 4.452        

0 Strain