Gene : Glyma.16G059300 G. max Wm82.a2.v1
Defline:  (1 of 7) PTHR10891//PTHR10891:SF621 - EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEIN Genomic Order:  593
Name:  ? Glyma.16G059300 Secondary Identifier:  ? PAC:30561941
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.16G059300 0.5kb upstream 0.5kb upstream 1364 true Chr16: 5791652-5793015 Glycine max
Glyma.16G059300 0.5kb upstream 0.5kb upstream 500 false Chr16: 5792516-5793015 Glycine max
Glyma.16G059300 0.5kb downstream 0.5kb downstream 1364 true Chr16: 5791152-5792515 Glycine max
Glyma.16G059300 0.5kb downstream 0.5kb downstream 500 false Chr16: 5791152-5791651 Glycine max
Glyma.16G059300 1.0kb upstream 1.0kb upstream 1864 true Chr16: 5791652-5793515 Glycine max
Glyma.16G059300 1.0kb upstream 1.0kb upstream 1000 false Chr16: 5792516-5793515 Glycine max
Glyma.16G059300 1.0kb downstream 1.0kb downstream 1864 true Chr16: 5790652-5792515 Glycine max
Glyma.16G059300 1.0kb downstream 1.0kb downstream 1000 false Chr16: 5790652-5791651 Glycine max
Glyma.16G059300 2.0kb upstream 2.0kb upstream 2864 true Chr16: 5791652-5794515 Glycine max
Glyma.16G059300 2.0kb upstream 2.0kb upstream 2000 false Chr16: 5792516-5794515 Glycine max
Glyma.16G059300 2.0kb downstream 2.0kb downstream 2864 true Chr16: 5789652-5792515 Glycine max
Glyma.16G059300 2.0kb downstream 2.0kb downstream 2000 false Chr16: 5789652-5791651 Glycine max
Glyma.16G059300 5.0kb upstream 5.0kb upstream 5864 true Chr16: 5791652-5797515 Glycine max
Glyma.16G059300 5.0kb upstream 5.0kb upstream 5000 false Chr16: 5792516-5797515 Glycine max
Glyma.16G059300 5.0kb downstream 5.0kb downstream 5864 true Chr16: 5786652-5792515 Glycine max
Glyma.16G059300 5.0kb downstream 5.0kb downstream 5000 false Chr16: 5786652-5791651 Glycine max
Glyma.16G059300 10.0kb upstream 10.0kb upstream 10864 true Chr16: 5791652-5802515 Glycine max
Glyma.16G059300 10.0kb upstream 10.0kb upstream 10000 false Chr16: 5792516-5802515 Glycine max
Glyma.16G059300 10.0kb downstream 10.0kb downstream 10864 true Chr16: 5781652-5792515 Glycine max
Glyma.16G059300 10.0kb downstream 10.0kb downstream 10000 false Chr16: 5781652-5791651 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302824 5265 Fabidae View MSA
124071613 5270 Rosid View MSA
123747964 5271 Pentapetalae View MSA
122795822 5272 Eudicot View MSA
122046502 5273 Angiosperm View MSA
121351910 5274 Embryophyte View MSA
123382405 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.08439 0.0 4.06742    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.445089 0.0 1.73364    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.363723 0.0 1.42851    
cufflinks 3.88691 0.0 13.4368   High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.108387 0.0 0.448857 Low  
cufflinks 0.0366152 0.0 0.16561 Low Low
cufflinks 0.016     Low Low
cufflinks 19.557     High High
cufflinks 0.993        
cufflinks 0.616        
cufflinks 0.555        
cufflinks 1.074        
cufflinks 0.024     Low Low
cufflinks 8.934     High High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.013     Low Low
cufflinks 0.02     Low Low
cufflinks 3.564        
cufflinks 0.269        
cufflinks 0.083     Low  
cufflinks 31.402     High High
cufflinks 0.017     Low Low
cufflinks 16.586     High High

0 Strain