Gene : Glyma.16G060000 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR12585:SF31 - SISTER CHROMATID COHESION 1 PROTEIN 2 Genomic Order:  600
Name:  ? Glyma.16G060000 Secondary Identifier:  ? PAC:30560486
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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.16G060000 0.5kb upstream 0.5kb upstream 8639 true Chr16: 5857893-5866531 Glycine max
Glyma.16G060000 0.5kb upstream 0.5kb upstream 500 false Chr16: 5866032-5866531 Glycine max
Glyma.16G060000 0.5kb downstream 0.5kb downstream 8639 true Chr16: 5857393-5866031 Glycine max
Glyma.16G060000 0.5kb downstream 0.5kb downstream 500 false Chr16: 5857393-5857892 Glycine max
Glyma.16G060000 1.0kb upstream 1.0kb upstream 9139 true Chr16: 5857893-5867031 Glycine max
Glyma.16G060000 1.0kb upstream 1.0kb upstream 1000 false Chr16: 5866032-5867031 Glycine max
Glyma.16G060000 1.0kb downstream 1.0kb downstream 9139 true Chr16: 5856893-5866031 Glycine max
Glyma.16G060000 1.0kb downstream 1.0kb downstream 1000 false Chr16: 5856893-5857892 Glycine max
Glyma.16G060000 2.0kb upstream 2.0kb upstream 10139 true Chr16: 5857893-5868031 Glycine max
Glyma.16G060000 2.0kb upstream 2.0kb upstream 2000 false Chr16: 5866032-5868031 Glycine max
Glyma.16G060000 2.0kb downstream 2.0kb downstream 10139 true Chr16: 5855893-5866031 Glycine max
Glyma.16G060000 2.0kb downstream 2.0kb downstream 2000 false Chr16: 5855893-5857892 Glycine max
Glyma.16G060000 5.0kb upstream 5.0kb upstream 13139 true Chr16: 5857893-5871031 Glycine max
Glyma.16G060000 5.0kb upstream 5.0kb upstream 5000 false Chr16: 5866032-5871031 Glycine max
Glyma.16G060000 5.0kb downstream 5.0kb downstream 13139 true Chr16: 5852893-5866031 Glycine max
Glyma.16G060000 5.0kb downstream 5.0kb downstream 5000 false Chr16: 5852893-5857892 Glycine max
Glyma.16G060000 10.0kb upstream 10.0kb upstream 18139 true Chr16: 5857893-5876031 Glycine max
Glyma.16G060000 10.0kb upstream 10.0kb upstream 10000 false Chr16: 5866032-5876031 Glycine max
Glyma.16G060000 10.0kb downstream 10.0kb downstream 18139 true Chr16: 5847893-5866031 Glycine max
Glyma.16G060000 10.0kb downstream 10.0kb downstream 10000 false Chr16: 5847893-5857892 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314105 5265 Fabidae View MSA
124069761 5270 Rosid View MSA
123746964 5271 Pentapetalae View MSA
122794410 5272 Eudicot View MSA
122048297 5273 Angiosperm View MSA
121349590 5274 Embryophyte View MSA
123426470 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.055142 0.0 0.22237 Low Low
cufflinks 0.345591 0.0 1.29231   High
cufflinks 0.172955 0.0 0.66616 Low  
cufflinks 0.163885 0.0 0.633432 Low  
cufflinks 0.132005 0.0 0.515471 Low  
cufflinks 0.102116 0.0 0.402348 Low  
cufflinks 0.628202 0.0 2.27994   High
cufflinks 0.0531889 0.0 0.214567 Low Low
cufflinks 0.097832 0.0 0.385951 Low  
cufflinks 0.015     Low Low
cufflinks 0.174        
cufflinks 0.101     Low  
cufflinks 0.033     Low Low
cufflinks 0.047     Low  
cufflinks 0.008     Low Low
cufflinks 0.115        
cufflinks 0.126        
cufflinks 0.08     Low  
cufflinks 0.184        
cufflinks 0.077     Low  
cufflinks 0.104        
cufflinks 0.123        
cufflinks 0.15        
cufflinks 0.185        
cufflinks 0.093     Low  
cufflinks 0.258       High

0 Strain