Gene : Glyma.16G062200 G. max Wm82.a2.v1
Defline:  (1 of 9) PTHR22880:SF156 - TRANSCRIPTION FACTOR GTE10 Genomic Order:  622
Name:  ? Glyma.16G062200 Secondary Identifier:  ? PAC:30560400
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.16G062200 0.5kb upstream 0.5kb upstream 8671 true Chr16: 6065323-6073993 Glycine max
Glyma.16G062200 0.5kb upstream 0.5kb upstream 500 false Chr16: 6065323-6065822 Glycine max
Glyma.16G062200 0.5kb downstream 0.5kb downstream 8671 true Chr16: 6065823-6074493 Glycine max
Glyma.16G062200 0.5kb downstream 0.5kb downstream 500 false Chr16: 6073994-6074493 Glycine max
Glyma.16G062200 1.0kb upstream 1.0kb upstream 9171 true Chr16: 6064823-6073993 Glycine max
Glyma.16G062200 1.0kb upstream 1.0kb upstream 1000 false Chr16: 6064823-6065822 Glycine max
Glyma.16G062200 1.0kb downstream 1.0kb downstream 9171 true Chr16: 6065823-6074993 Glycine max
Glyma.16G062200 1.0kb downstream 1.0kb downstream 1000 false Chr16: 6073994-6074993 Glycine max
Glyma.16G062200 2.0kb upstream 2.0kb upstream 10171 true Chr16: 6063823-6073993 Glycine max
Glyma.16G062200 2.0kb upstream 2.0kb upstream 2000 false Chr16: 6063823-6065822 Glycine max
Glyma.16G062200 2.0kb downstream 2.0kb downstream 10171 true Chr16: 6065823-6075993 Glycine max
Glyma.16G062200 2.0kb downstream 2.0kb downstream 2000 false Chr16: 6073994-6075993 Glycine max
Glyma.16G062200 5.0kb upstream 5.0kb upstream 13171 true Chr16: 6060823-6073993 Glycine max
Glyma.16G062200 5.0kb upstream 5.0kb upstream 5000 false Chr16: 6060823-6065822 Glycine max
Glyma.16G062200 5.0kb downstream 5.0kb downstream 13171 true Chr16: 6065823-6078993 Glycine max
Glyma.16G062200 5.0kb downstream 5.0kb downstream 5000 false Chr16: 6073994-6078993 Glycine max
Glyma.16G062200 10.0kb upstream 10.0kb upstream 18171 true Chr16: 6055823-6073993 Glycine max
Glyma.16G062200 10.0kb upstream 10.0kb upstream 10000 false Chr16: 6055823-6065822 Glycine max
Glyma.16G062200 10.0kb downstream 10.0kb downstream 18171 true Chr16: 6065823-6083993 Glycine max
Glyma.16G062200 10.0kb downstream 10.0kb downstream 10000 false Chr16: 6073994-6083993 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299827 5265 Fabidae View MSA
124067873 5270 Rosid View MSA
123742171 5271 Pentapetalae View MSA
122795525 5272 Eudicot View MSA
122044532 5273 Angiosperm View MSA
123429103 5275 Viridiplantae View MSA
121347470 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.3559 0.0 27.6966   High
cufflinks 7.06722 0.0 18.8801    
cufflinks 7.00509 0.0 18.7097    
cufflinks 8.27506 0.0 22.0768    
cufflinks 4.85217 0.0 13.1358   Low
cufflinks 5.04404 0.0 13.6263   Low
cufflinks 9.04684 0.0 24.1417   High
cufflinks 5.71848 0.0 15.3603    
cufflinks 6.56548 0.0 17.5657    
cufflinks 2.402       Low
cufflinks 5.306        
cufflinks 4.409        
cufflinks 2.404       Low
cufflinks 2.234       Low
cufflinks 8.732     High High
cufflinks 5.767        
cufflinks 2.79       Low
cufflinks 4.077        
cufflinks 3.863        
cufflinks 6.939     High High
cufflinks 5.942     High  
cufflinks 6.469        
cufflinks 3.998        
cufflinks 5.434        
cufflinks 5.8        
cufflinks 3.467        

0 Strain